Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0528 ATGATTCTTCATGTGGAAGATGCTAAATTATCCATGCTGGTTATTTTCTCATGGTTGTGTCTGCATACTTGTTCTCATGCATTGGAGAGTATATTTGATCACTCAACTACACTATGCTCGCCAATGCATAAGTTCTGTTTGAAATTTGCTCCTCTTCAGATTGATCCCACTCACAGATGGATTGCCAACAGAAATGACCCTATTGACAACAGTTCTGGGGTGCTTCTAACATGTAATCATTCAGGTGCTTTGAGTATCACTAGTCAAGATGTTGTTGTCACACTTTTGGATTCTAGGAACTTCATCCTTGGAGAATATGATGCTAGTGGATATATGAAGAAAGTGATGTGTCAAAGCTTTGATCATCCTTCAGATGTGTTCTACCTGTGGGAACCAAGGAAAGGAGAGTTGGTCATAAGGAGGGGAGGGATCATATTTGGACAAGTGGGGTTCTGTGAAACAACAGACAATGTTCCAAGGCATATTCAGCTTATGTATGAATACAACATTGTCTCAAACAAGGATGAAGAGTCCTTTAGTTATGTAAGTCATAATGATCACTCGCAGAGGGTGTTGTTTAGTAATGGAAACTTGCAGGATACAGAAAATGGAGATTTAGCTCAAGCTCAAAACTGTAACATTGTTTTACTCCAATCTTGCCTTAACAGAGAAGAGAAGCAAATGGGGAGCAGCATGTTAAATTTTGTGGTGTCTGAGAGATGGAAAAGACAAGGAGACGCTGAGTTTAAAAATGAATTGATTTTCATATCTGAACTCCAACACATGAATCTTGTTCAGTTGTTGTGTTGTTGCATTCATGAAGATGAAAGAATGCTAATCTACGAGTATATGCCCAACAAAAGCTTGGACTACTTTTTATCATGCTTAGTAAAACAAAAACTAGATCTTGCATATATCAGCTTTATTTATTGGAGAAAACTTCAGAACTTAATTGATGGGATTGCTCAAGGACTGATCTATCTACATAAGTATTCAAGATTAAGAGTAGTTCACAGATATCTGAAAGCAAGTAACAACATTCTACTTTATTCAAATATGAATCTCAAAATTTCAGATTTTGGCATGGCCAGAATTTTCACACTAGAGTCAGATATAAACTCTAAAAGGATTGTTGGAACATGTGCCAGAAACAATGCTGATTGGCCACTCAATCTAGTTGGACATGTATATTATCTGAGGGTGTTTGATTGCTGCAACTATGTAACCAAATTAAATAATGAGAGTTCCCTATTGTTTTGTTTGGCATCTACTATAGCCTGGGAGCTATGGAAACAAGGCCATGCACTAGACCTCTTAGATCCAACTTTAAGAAAATTATTCATTCAAGAGGGAGCAATAAGATGCATTGATGTTGGTCTTCTATGTGTAGAAGAATGTGCAGCTGATCGTCCCAACATTTCAGAGATAATCCCCATGTTAACCAGTGAAATTGCAACATTTCCATTGCAAAGAAGACCAGCATTTTACCATGGAAGAAAGTTGGCTGAGGAAGATATCTCTTTAATTGATAATGAAACTGTTGGAATTTGA 1551 0.3714 MILHVEDAKLSMLVIFSWLCLHTCSHALESIFDHSTTLCSPMHKFCLKFAPLQIDPTHRWIANRNDPIDNSSGVLLTCNHSGALSITSQDVVVTLLDSRNFILGEYDASGYMKKVMCQSFDHPSDVFYLWEPRKGELVIRRGGIIFGQVGFCETTDNVPRHIQLMYEYNIVSNKDEESFSYVSHNDHSQRVLFSNGNLQDTENGDLAQAQNCNIVLLQSCLNREEKQMGSSMLNFVVSERWKRQGDAEFKNELIFISELQHMNLVQLLCCCIHEDERMLIYEYMPNKSLDYFLSCLVKQKLDLAYISFIYWRKLQNLIDGIAQGLIYLHKYSRLRVVHRYLKASNNILLYSNMNLKISDFGMARIFTLESDINSKRIVGTCARNNADWPLNLVGHVYYLRVFDCCNYVTKLNNESSLLFCLASTIAWELWKQGHALDLLDPTLRKLFIQEGAIRCIDVGLLCVEECAADRPNISEIIPMLTSEIATFPLQRRPAFYHGRKLAEEDISLIDNETVGI* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0528 516 Pfam Protein tyrosine and serine/threonine kinase 238 372 IPR001245 GO:0004672|GO:0006468
Pvu5g0528 516 SUPERFAMILY alpha-D-mannose-specific plant lectins 55 138 IPR036426 -
Pvu5g0528 516 Gene3D Transferase(Phosphotransferase) domain 1 404 494 - -
Pvu5g0528 516 SUPERFAMILY Protein kinase-like (PK-like) 245 489 IPR011009 -
Pvu5g0528 516 Gene3D Phosphorylase Kinase; domain 1 232 283 - -
Pvu5g0528 516 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 242 495 - -
Pvu5g0528 516 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 242 495 - -
Pvu5g0528 516 Gene3D Transferase(Phosphotransferase) domain 1 284 384 - -
Pvu5g0528 516 ProSiteProfiles Protein kinase domain profile. 168 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0528 Pvu-Chr5 6122654 6125913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0528 244 516 Receptor kinase-like Gene Family AT4G11530 42.049 8.66e-58 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu5g0528 PK_Tyr_Ser-Thr 8.8e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0528 - - pvu:PHAVU_005G051000g 1059.67