Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0521 ATGCAGAAACATCAATACAATTCCATGGAATCTAGAAATGAGGAATTTCATTCTGCATCGCAATTGGTCCCGCAAGACCTTCGTGAAGGCATGCATATCAATGCACGACCTCCAGCTTATAACATGTCAGAAAATAAACCTGTGCTTAATTATTCCATACAGACAGGTGAGGAATTTGCTTTTGAGTTTATGAGAGATAGGGTGAATCTGAGGAAACCTCCCTTTCCAAATGTTGTGGGTGATCCCAACTATTCGACAGGCTATATGGAATTGAAAGGCATTTTGGGACATACAGGATCTGAGAGTGGATCTGATATATCTGTGCTCACAAAGACTGAGAAGGGTCCAAAAGAGTTTGACAGGAGGAACTCTTCTCAACACCAGGACAGAACTAATTATGGTTCAGCTCGATCAATTCCTAGAACTTCATCTAATCAAGAAAGTTACCGAGTCCTTCATGGTACTGCCTCTTCCAGTGCATCTGAAATTTCATCCGTGAAGATGAAGGTTCTATGCAGCTTTGGGGGTAGAATATTGCCAAGGCCTGGTGATGGAAAGCTTAGATATGTTGGGGGTGAAACGCGTATTATTACTATAAGAAGAGACATACGTTTTCAGGAGCTTATGCAGAAAACATCATTAATTTATAGTGAAGCTCACGTGATAAAGTATCAGCTCCCTGGAGAAGATCTTGATGCGTTAGTTTCAGTATCTTCTGATGAGGATCTGCGGAATATGATGGAGGAATGTCATGATTTACAAGGCGAACGAGGATCAACAAAGCTTAGGATGTTTCTGTTCTCTATAAATGATTTGGATGATACTCAGTTTGGCATAGGAAGCATTGACGGTGATTCTGAAATCCAGTATGTAGTTGCTGTCAATGGCATGAACATGGATTCAAGAAACAACTCAATCCTTCATGCTGCAAGTGGCTCTACCAATAACTTGCATGAATTGAATGAACAAAATAATGAGAGGGAGACCAACAGAGTTTTGATGGACTCATTTGGTGTTAGTAGCTCATCTTTGGCTGAGAATGTTAAATCATCATTGACTATTCAATCTTCACAACAAATGCTTCCAATCTCCTCTAATGCTTATGATACCCATCCATTGTTTTATGATGACCAAGTTATTCACCAAGGGGAAGCTAGTCAATATCCACTACAGCACGGTCTTGGTCCTTCTAACAACTCCGCTCGCAATCTTGGAGAGATTCCAGTTTCTATGCCTATTCATAATCTTGTTAACCAAGGGATCATGAATGATGGACAAACATCTAGTGAGTTGCAGGTACAAATTTCAGCTGTGCCAGACATGTTGGTAAAAAGAAAGGGTGATAATTTCATTCATACAGGCAATGATACAGGAAAAGTTTTCCCCTTAGAAGCACCATATCCTATTGCTTTGCAGCCATTTGAGGGGAATTTACATGCTAATTTACCAGAGGCACCATTTACCGCTGCTATATCAGAAGGCCTTCATCCTGCACTGCCATCAAAGAACAAGAGTAAGCACCAGCAGTCTGACGATGCCCATTCATTAATCGGTAGTATGAATCCCACACAGACTCCTAAGTCTGGTGAAGATGATTTCTATACTACACCCATTGATGCATTCAGCCGTCCTCAGGTTGATGCTGAGTCCAATGTGATTGATTTCGGTAGCCTTGAACCACCTCCACTTCCCAACAGAGTCTATTATTCAGAGAGAATTCCAAGGGAGCAGGAAGATTTGCTGAATCGATCTACAAAGTCAGATGATGCGCATGGTTCTCACTTACTCATGTCAGATTTGCTTTCTGACTTCAGCCAGAAGAATTCAGAAACAGAATCCAACGACATATCGCACAATGGGAATATGTCAAATCTGAACATTATGTCTAGTTCAGCATCAAAGCCTTTACAAGCAGATGGTAATACCACTGATGATGGATTTGCCCCACCACCAATATACAAAAAATGGCCTGATACAACAAATAAGTTGAATTCAAAGTTTTCACTGCATGTGAATTCTGAGTTGAAGCAAGTGTCAGCAGATAATAAACTTTCTAGAATTGAGGACCAGGTCCTTTATTCTGAAAACAATACCAATCGCTCCAAAGACAACCATAACATCCTCTTAGTTGATGAAACCAAAGGTACTGGACATCTAGCATTTCACCAGGTTCTTCCCGTTGAAAATCTGAATCTAGTATCGAAACCTGCAGACCTCAATTTGGTTGAAGTTTCTACCAGGGAATTGGATAACGGTACCAAGGTTCAAGCTCTGCCTTTTCCTTCAACTGGAAACACAGGCCAAGATGTTTCTCAAAATTTCCCCCCAGAAGTTAAACCAAGATCTACTACTCAGGGAGACATTCTTATTGATATTGAGGACAGGTTTCCCCGTGATATCCTTTATGGTATGTTCTCCAAAGAAATACTTTCCGAAGATTCCTCAAGTATTGGTCCGTTACCAACAGATAGAGCAGTGAGGAAAGTTCAAGATGGGGATAGTAAATCTCAGCAGTCTGCTGCTCTACTGGCAGATGGTGCTTTGGCAGGACACAAGGAATCCCGCCTAAATTTCGGTGGTGGCGAAAATCAGAAAAATGTACCGGCAACAACTAAAACAGAATCAACTCTCTTTCAACAAAAATATGAGCATTCCCAACTAAAGGGCAATGAAAATAAGAACATAGATGCCATAACAGAAAATATAAGACCACAGGAATCTGAATACCAGGAGGATGACAAGAATGAAGCAAGGAATGTGGGTTTAGCAGGGGATTTTGACAGTACTGTGCAGTTCATAAAGAATGATGATCTTGAAGAGCTGCGAGAGCTGGGTTCTGGTACCTTTGGGACTGTATACCATGGAAAGTGGAGGGGATCGGATGTTGCTATTAAAAGAATAAAGAAAAGCTGTTTCGCTGGTCGATCTTCAGAACAAGAGAGACTGACCATAGAATTCTGGCGTGAAGCTGACATACTTTCCAAGCTTCACCATCCAAATGTGGTGGCATTTTATGGTGTAGTTCAGGATGGACCAGGAGCAACATTAGCGACTGTCACTGAGTACATGGTGGATGGTTCTCTCAGGACTGTTTTGCTTCGTAAGGATAGATATCTTGATCGCCGTAAGAGGTTGATAATAGCCATGGATGCAGCTTTTGGAATGGAATATTTACACTCAAAAGATATCGTGCATTTTGACTTGAAATGTGACAATTTGCTTGTGAACTTGAAGGATCCTTTACGGCCAATATGCAAGGTTGGTGATTTTGGCCTATCAAAAATTAAGAGAAACACCCTGGTGTCTGGTGGTGTTCGTGGAACTCTACCTTGGATGGCACCAGAGCTTCTAAACGGTAGCAGCAATAAGGTCTCAGAAAAGGTTGATGTCTTCTCTTTCGGCATTGTCTTATGGGAGATTCTTACTGGTGAAGAGCCATATGCTAATATGCACTATGGTGCAATTATTGGAGGTATTGTGAATAACACATTGAGACCTACAATCCCAAGTTACTGTGATCTTGAATGGAAAACACTAATGGAGCAGTGTTGGGCACCCAATCCTGCAGTTAGGCCATCCTTCACAGAAATTGCTCGCCGTTTGCGTGTGATGTCTGCAGCTGCTATTCAGAACAAAGGACAGCTCCACAAGGCATCTAAATGA 3663 0.4147 MQKHQYNSMESRNEEFHSASQLVPQDLREGMHINARPPAYNMSENKPVLNYSIQTGEEFAFEFMRDRVNLRKPPFPNVVGDPNYSTGYMELKGILGHTGSESGSDISVLTKTEKGPKEFDRRNSSQHQDRTNYGSARSIPRTSSNQESYRVLHGTASSSASEISSVKMKVLCSFGGRILPRPGDGKLRYVGGETRIITIRRDIRFQELMQKTSLIYSEAHVIKYQLPGEDLDALVSVSSDEDLRNMMEECHDLQGERGSTKLRMFLFSINDLDDTQFGIGSIDGDSEIQYVVAVNGMNMDSRNNSILHAASGSTNNLHELNEQNNERETNRVLMDSFGVSSSSLAENVKSSLTIQSSQQMLPISSNAYDTHPLFYDDQVIHQGEASQYPLQHGLGPSNNSARNLGEIPVSMPIHNLVNQGIMNDGQTSSELQVQISAVPDMLVKRKGDNFIHTGNDTGKVFPLEAPYPIALQPFEGNLHANLPEAPFTAAISEGLHPALPSKNKSKHQQSDDAHSLIGSMNPTQTPKSGEDDFYTTPIDAFSRPQVDAESNVIDFGSLEPPPLPNRVYYSERIPREQEDLLNRSTKSDDAHGSHLLMSDLLSDFSQKNSETESNDISHNGNMSNLNIMSSSASKPLQADGNTTDDGFAPPPIYKKWPDTTNKLNSKFSLHVNSELKQVSADNKLSRIEDQVLYSENNTNRSKDNHNILLVDETKGTGHLAFHQVLPVENLNLVSKPADLNLVEVSTRELDNGTKVQALPFPSTGNTGQDVSQNFPPEVKPRSTTQGDILIDIEDRFPRDILYGMFSKEILSEDSSSIGPLPTDRAVRKVQDGDSKSQQSAALLADGALAGHKESRLNFGGGENQKNVPATTKTESTLFQQKYEHSQLKGNENKNIDAITENIRPQESEYQEDDKNEARNVGLAGDFDSTVQFIKNDDLEELRELGSGTFGTVYHGKWRGSDVAIKRIKKSCFAGRSSEQERLTIEFWREADILSKLHHPNVVAFYGVVQDGPGATLATVTEYMVDGSLRTVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKDIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDLEWKTLMEQCWAPNPAVRPSFTEIARRLRVMSAAAIQNKGQLHKASK* 1221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0521 1220 MobiDBLite consensus disorder prediction 632 653 - -
Pvu5g0521 1220 MobiDBLite consensus disorder prediction 512 531 - -
Pvu5g0521 1220 MobiDBLite consensus disorder prediction 758 780 - -
Pvu5g0521 1220 PRINTS Tyrosine kinase catalytic domain signature 1020 1033 IPR001245 GO:0004672|GO:0006468
Pvu5g0521 1220 PRINTS Tyrosine kinase catalytic domain signature 1057 1075 IPR001245 GO:0004672|GO:0006468
Pvu5g0521 1220 PRINTS Tyrosine kinase catalytic domain signature 1128 1150 IPR001245 GO:0004672|GO:0006468
Pvu5g0521 1220 PRINTS Tyrosine kinase catalytic domain signature 1172 1194 IPR001245 GO:0004672|GO:0006468
Pvu5g0521 1220 Gene3D - 186 269 - -
Pvu5g0521 1220 SMART PB1_new 182 269 IPR000270 GO:0005515
Pvu5g0521 1220 Gene3D Transferase(Phosphotransferase) domain 1 1025 1220 - -
Pvu5g0521 1220 MobiDBLite consensus disorder prediction 128 153 - -
Pvu5g0521 1220 SMART serkin_6 938 1204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0521 1220 CDD STKc_MAP3K-like 944 1201 - -
Pvu5g0521 1220 ProSiteProfiles Protein kinase domain profile. 938 1203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0521 1220 MobiDBLite consensus disorder prediction 112 153 - -
Pvu5g0521 1220 SUPERFAMILY Protein kinase-like (PK-like) 926 1200 IPR011009 -
Pvu5g0521 1220 SUPERFAMILY CAD & PB1 domains 184 275 - -
Pvu5g0521 1220 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1063 1075 IPR008271 GO:0004672|GO:0006468
Pvu5g0521 1220 Pfam PB1 domain 184 267 IPR000270 GO:0005515
Pvu5g0521 1220 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 81 825 - -
Pvu5g0521 1220 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 823 1220 - -
Pvu5g0521 1220 CDD PB1_UP2 171 267 - -
Pvu5g0521 1220 MobiDBLite consensus disorder prediction 112 127 - -
Pvu5g0521 1220 ProSitePatterns Protein kinases ATP-binding region signature. 944 969 IPR017441 GO:0005524
Pvu5g0521 1220 PANTHER SERINE-THREONINE PROTEIN KINASE 823 1220 - -
Pvu5g0521 1220 PANTHER SERINE-THREONINE PROTEIN KINASE 81 825 - -
Pvu5g0521 1220 MobiDBLite consensus disorder prediction 496 534 - -
Pvu5g0521 1220 MobiDBLite consensus disorder prediction 758 782 - -
Pvu5g0521 1220 Gene3D Phosphorylase Kinase; domain 1 924 1024 - -
Pvu5g0521 1220 Pfam Protein tyrosine and serine/threonine kinase 939 1201 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0521 Pvu-Chr5 5954337 5962895 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0521 34 618 MAP Kinase Kinase Kinase AT1G16270 38.836 8.44e-98 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pvu5g0521 PK_Tyr_Ser-Thr 2e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0521 - - var:108333936 2170.2