Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0520 ATGGAAACTAGATTTGATGAATGGCACCAGTCTGGATCACAGCCAGTGATGCAGGACAATCTGGATGGCACACATACCCGTAGAAGACCAGTTGACCTTAATACATCAGAAGTTAAACCTGTACTTAATTACTCTATACAGACAGGTGAAGAATTTGCTCTTGAGTTTATAAGAGATAAGGTGAATATGAGGAAGCCTGTATTATCAGATGTCAGTGATTCAAATTATACCCCAGGTTATATGGAACTGAAAGGCATTTTAGGCATCAGCCATGCAGGATCAGAAAGTGGATCTGATATCTCTATGCTCTCAATGGCTGAGAAATATCCAAAAGAATTTGATAGAACGAGTACATTATTACCTGGAGAAAGAATCAACTATGGGTCTATCAGGTCAATGCCAAGAACTTCATTGAATCAGGACAATAGACAATTTGTGCCTGGGTATGGCTCTTTCGGAGCTTATGATAGATCAATGATTATGAAGTTTCTTTGCAGCTTTGGGGGTAGAATATTGCCACGACCATGCGATGGACATCTAAGGTATGTTGGAGGCCAAACACGTATTCTTCGAATAAGAAAGGACATATCTTGGCTGGAGCTCATGCAGACAGCATTACAAATCTATAGTCAGGTTTATGCAATCAAGTATCAGCTTCCTGGGGAAGATCTTGATGCTTTGGTATCTGTGTCATCTGATGAGGATTTGCAGAATATGATGGAGGAATGTAATCATCTACAAGATAGGGAAGGATCACAAAAGCCTAGGATGTTTTTGTTCTCAATGAGTGATTTGGAGGATGCTCAATTTGGTCTCAGCAGTATGGGTGATGATTCTGAGATTCAGTATGTTGTTGCTGTTAATGGCATGGACTTGGGATCAAGAAAAAACACTACCATGATTGGTGTCAGCGTTTCTGCAAATGACATAAATGAATTGGACAGGCAAAGTATTGACAGGGAGACTAATAATGGAGTTGGTATAGAATCTATTGTACAAGGAAATCCTCCCCCAACTAACAATTTTGACTCATCATTGGCTTCTCAATCTTCACCATCAGTGCTACCAACTTCCTCGAATTCTTACGAAAAATATCCACTGTTTTATGGTGATCAAATGATGTGGCATGGGGAGCTTAGTAATAGTAATCAATACTTTATTAATCATGGCCTTGTTCCTTCTCATAAACCTGTTACTGGAGAGACTCCGATGATTATGCCTCCCCATATGCTTGTCAATCAACAAGGGATTTTGAATGAAGGTCTTCCGCCTCGAGGAATACAAGTACAAAATTCAGAAATACCAACAACATTTGCAAACAAGATGGTTATTAGTTCAATTCCACAAGTAAGTGACCCTGGGAAAGTTTTGGCCTCAGAATTACCATCACCCCCTCCTACTCAACTGCTTAATGGTTACATTAAAAATAATTTTCCTGAAGCATCTGTTGTAGTTACTGCACCAGAGGGGTTTTCATTGCATCCTCCAAACATGGACAAGCACCAAGATTATGAAGAGACTTCTTCTACATGTAGCAGTGCATTTGGTCCTACATATGTTGATTCCCACTCCAATGCATCTGACTTGAGTTCTCTTCATCCTCCTCCTCTTCCAAAGAGAGTTTACTATTCGGAGAGAATTCCACGGGAAGAAGTAGAGTTGCTGAACCGGTCCTCAAAATCCGATGATACACACAACTCTCAGTTTCATGTTTCAGATTTACTCTCTGATGTCAACCCACCAGATTCAGTTAGAGAATCAGTTAACAAGTTGCGTGATGGAAATCTGCCTAATCTAAATGAGGAATTAAGCATCACAGAAAATCCATTACATGCAAATGTCTTTGCTGTTGATAATGGGACTGCGAATAATCAAATATACAAACAGCTGCCTGATACAAGCACTCAGATAAAATCAAAGCTAACAGAGCATGTGAATCCTGAGCTAAGGCAGGCATTACCGGACAATGAAGGACACACAAATGTGTTAAATAAAGATAATGTTGTTGGGTTGGAAATGGAAATTTATAGTAATAATAGCTATAACAAACCCCTGATTGATGAGACAAAAGCCAATAAACTTGACTTGCATAATTTGCCCCAGGTTTCTTCTGGTAAGAACCTTGATGATCCTGCATCCAATCTTCCAGAGGTTGATTGGGGTGATACCTCTGTGAAGGAGTCTAATGACAATACTAATGTGCAAGCCTTAGCTGTATCTCGAAATGGGAATATAGATGATGATTTTGAAGAATTTCCTTCTGATGTCGTTTCAAAACAAGCACATGTTGACATCCTTATTGATATTAATGATCGGTTTCCTCGTGAATTTTTTACTGATATATTCTCTAAAGTAGTTCTTGAAGAAGATCCCTCTAGTTTCCATCCATTAACCTCAAATGGAGTGGGCTTAAGTGTAAACATGGAAAATTGTGAACCTAAACGATGGTCTTATTTTCAAAAATTGGCTCAAGCAGGGATTGATAGTGTGTCTCTTATTGATCAAGATCATCTTGGTTTTGCACCTGCGATAGGAAAAGTGGTTGGAGATGATAGGACTCAACATGTTACACCTTTAACAACTGATGAAGTTTCTCTGAACCATGCCGACTCCCACCTCAATTTTGTAGAAGAAAATTTGCTTGGAAGGATTGGAGCAGAAACGAAATCTAACTATGATCATTCCCAAGTGAATGACACTGAAAGTATGCAATTTTCCGCCATGATGGAAAACATTAGAGCTCAAGAGTCAGAATGTGAGGTTGGGATGTTTGAAAAAAGGAATGGCAATGTACATCCTCTTGATACGAGTTCTTTACAGGTCATAATGAATGACGATCTTGAAGAGCTGAAGGAACTGGGTTCTGGTACCTTTGGGACAGTGTATCATGGAAAATGGCGAGGAACAGATGTTGCCATCAAAAGAATAAAGAAAATATGCTTCACTGGTCGATCATCTGAGCAAGAGAGACTGACTGTAGAATTCTGGCGGGAAGCTGATATTCTTTCCAAGCTTCATCATCCTAATGTGGTGGCATTTTATGGTGTAGTGCAGGATGGACCAGGAGGAACAATGGCTACTGTTACAGAGTACATGGTGGATGGTTCTCTTAGGCACGTGTTACTTCGCAAGGATAGGTATCTTGATTTTCGTAAAAGATTGATAATTGCGATGGACACAGCTTTTGGAATGGAATATTTACACTCACAAAATATTGTACACTTTGACTTAAAATGTGACAATTTGTTGGTGAACATGAAAGATCCTATGCGGCCTATATGCAAGGTTGGGGATTTTGGATTGTCAAAAATTAAAAGAAATACCCTGGTTTCTGGTGGTGTGAGAGGGACTCTTCCTTGGATGGCACCAGAGCTTCTGAATGGTAGCAGCAACAAGGTCTCAGAAAAGGTTGACGTGTTCTCCTTTGGCATAGTATTATGGGAGATTCTAACCGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATCATAGGTGGGATTGTGAATAACACATTAAGGCCAACAATACCAAATCATTGTGACTCTGAATGGAGAAAACTGATGGAGCAGTGTTGGGCACCCAATCCTGCAGCTAGGCCCTCCTTCACAGAAATAGCCAGTCGATTGCGCATAATGTCTGCAGCAGCTAAATCATCTGGCCAAAAGACATCTAAATGA 3681 0.3999 METRFDEWHQSGSQPVMQDNLDGTHTRRRPVDLNTSEVKPVLNYSIQTGEEFALEFIRDKVNMRKPVLSDVSDSNYTPGYMELKGILGISHAGSESGSDISMLSMAEKYPKEFDRTSTLLPGERINYGSIRSMPRTSLNQDNRQFVPGYGSFGAYDRSMIMKFLCSFGGRILPRPCDGHLRYVGGQTRILRIRKDISWLELMQTALQIYSQVYAIKYQLPGEDLDALVSVSSDEDLQNMMEECNHLQDREGSQKPRMFLFSMSDLEDAQFGLSSMGDDSEIQYVVAVNGMDLGSRKNTTMIGVSVSANDINELDRQSIDRETNNGVGIESIVQGNPPPTNNFDSSLASQSSPSVLPTSSNSYEKYPLFYGDQMMWHGELSNSNQYFINHGLVPSHKPVTGETPMIMPPHMLVNQQGILNEGLPPRGIQVQNSEIPTTFANKMVISSIPQVSDPGKVLASELPSPPPTQLLNGYIKNNFPEASVVVTAPEGFSLHPPNMDKHQDYEETSSTCSSAFGPTYVDSHSNASDLSSLHPPPLPKRVYYSERIPREEVELLNRSSKSDDTHNSQFHVSDLLSDVNPPDSVRESVNKLRDGNLPNLNEELSITENPLHANVFAVDNGTANNQIYKQLPDTSTQIKSKLTEHVNPELRQALPDNEGHTNVLNKDNVVGLEMEIYSNNSYNKPLIDETKANKLDLHNLPQVSSGKNLDDPASNLPEVDWGDTSVKESNDNTNVQALAVSRNGNIDDDFEEFPSDVVSKQAHVDILIDINDRFPREFFTDIFSKVVLEEDPSSFHPLTSNGVGLSVNMENCEPKRWSYFQKLAQAGIDSVSLIDQDHLGFAPAIGKVVGDDRTQHVTPLTTDEVSLNHADSHLNFVEENLLGRIGAETKSNYDHSQVNDTESMQFSAMMENIRAQESECEVGMFEKRNGNVHPLDTSSLQVIMNDDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKICFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEYMVDGSLRHVLLRKDRYLDFRKRLIIAMDTAFGMEYLHSQNIVHFDLKCDNLLVNMKDPMRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPNHCDSEWRKLMEQCWAPNPAARPSFTEIASRLRIMSAAAKSSGQKTSK* 1227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0520 1226 Pfam Protein tyrosine and serine/threonine kinase 948 1210 IPR001245 GO:0004672|GO:0006468
Pvu5g0520 1226 Gene3D Phosphorylase Kinase; domain 1 940 1034 - -
Pvu5g0520 1226 SMART serkin_6 947 1213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0520 1226 CDD PB1_UP2 164 260 - -
Pvu5g0520 1226 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1072 1084 IPR008271 GO:0004672|GO:0006468
Pvu5g0520 1226 Gene3D Transferase(Phosphotransferase) domain 1 1035 1226 - -
Pvu5g0520 1226 MobiDBLite consensus disorder prediction 556 585 - -
Pvu5g0520 1226 SMART PB1_new 175 262 IPR000270 GO:0005515
Pvu5g0520 1226 MobiDBLite consensus disorder prediction 1 28 - -
Pvu5g0520 1226 ProSitePatterns Protein kinases ATP-binding region signature. 953 978 IPR017441 GO:0005524
Pvu5g0520 1226 PRINTS Tyrosine kinase catalytic domain signature 1029 1042 IPR001245 GO:0004672|GO:0006468
Pvu5g0520 1226 PRINTS Tyrosine kinase catalytic domain signature 1066 1084 IPR001245 GO:0004672|GO:0006468
Pvu5g0520 1226 PRINTS Tyrosine kinase catalytic domain signature 1137 1159 IPR001245 GO:0004672|GO:0006468
Pvu5g0520 1226 PRINTS Tyrosine kinase catalytic domain signature 1181 1203 IPR001245 GO:0004672|GO:0006468
Pvu5g0520 1226 ProSiteProfiles Protein kinase domain profile. 947 1212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0520 1226 Pfam PB1 domain 178 260 IPR000270 GO:0005515
Pvu5g0520 1226 PANTHER SERINE-THREONINE PROTEIN KINASE 75 1226 - -
Pvu5g0520 1226 CDD STKc_MAP3K-like 953 1210 - -
Pvu5g0520 1226 MobiDBLite consensus disorder prediction 327 357 - -
Pvu5g0520 1226 Gene3D - 181 261 - -
Pvu5g0520 1226 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 75 1226 - -
Pvu5g0520 1226 SUPERFAMILY CAD & PB1 domains 177 264 - -
Pvu5g0520 1226 SUPERFAMILY Protein kinase-like (PK-like) 933 1210 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0520 Pvu-Chr5 5944325 5952834 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0520 34 572 MAP Kinase Kinase Kinase AT1G16270 38.629 1.60e-89 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Pvu5g0520 PK_Tyr_Ser-Thr 9.7e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0520 - - gmx:100799639 2015.35