Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0514 ATGAAAGAGAGTGGTAGAAAACAAGGTACCATGTCGCCATGTGCGGCCTGCAAGCTTCTTCGAAGGAGGTGCACGAGGGATTGTGTGTTTGCTCCTTATTTCCCTGCTGATGAACCCCAGAAGTTTGGCAGTGTGCACAAGGTTTTCGGGGCTAGCAATGTGAACAAAATGCTACAGGAATTACCTGAGCACCAAAGAAGTGATGCAGTGAGTTCAATGGTATATGAAGCAAATGCAAGGGTGAGGGACCCTGTGTATGGATGTGTGGGAGCCATTTCCTCTCTGCAGCAACAAGTTGATGTGCTCCAAACCCAATTGGCGCAGGCACAAGCAGAGGTTGTTCACATGAGAATGCGGCAACTGTCACCACCACCATCAGATCAACACCACCACCAAGCCTCCCTAATGGCACCTGAGCCCTCCAATTCATCATCAGAAAACTTGTTCCAATCTAGCAGGGTATTGTCTGCACAAACCAAGTCTCTTTTTGGCATGGAGATGGTGGTTGACCAGGCTATGATGGGGCAATCCTTGTGGTCATACTAG 546 0.489 MKESGRKQGTMSPCAACKLLRRRCTRDCVFAPYFPADEPQKFGSVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDVLQTQLAQAQAEVVHMRMRQLSPPPSDQHHHQASLMAPEPSNSSSENLFQSSRVLSAQTKSLFGMEMVVDQAMMGQSLWSY* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0514 181 MobiDBLite consensus disorder prediction 125 150 - -
Pvu5g0514 181 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 175 - -
Pvu5g0514 181 Coils Coil 92 119 - -
Pvu5g0514 181 MobiDBLite consensus disorder prediction 121 150 - -
Pvu5g0514 181 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 175 - -
Pvu5g0514 181 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Pvu5g0514 181 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0514 Pvu-Chr5 5784393 5788747 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0514 1 180 AS2 family AT1G31320 65.556 9.01e-72 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pvu5g0514 LOB 4.2e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0514 - - gmx:100803188 290.426