Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0505 ATGGTCATGGAAACAAGAAGAGTGAGAAAGTGTGTTATGATACTTCTCCTCTACCTCACTTTCTCTGCCATTTCTCTCACTCAATGTGATGCAGATAGATCAATAATGAGGGTATTGAGAGGCCCTAAAGATAAAAGAAATTCAACCAACAAAAACCCAAAGAAGTTGAAAACAGTTAAGCATTTAGATGAGAATCCAACCATTTTCTCATCAAATGTAGAACCCTATAGTCTTAGCTCCCCATTCTCTTTGCCCCCTTATGACTCACTGGCTCCAATCCCACTCCCAGAAAACAGCCCTCCATTTTGTGTGTTCCCACCACCAGGTACTCCTTCCACCACCATGCCTACCCCCACAGGCTTTCAACCCACAATACCATCACCACCTGACTTTTACACCTCACCGGTTCTCCCAACCCAAAACCCACCTCCAAACCCCTTAATCATAACACCAGGCCCACCAGATTCTTTCCCCACACCAACCCCAGAAATTATTCCTGGCCCACCCACTATCACGCCCGGCTCGCCTGAGCCCGTGCTCAATCCTCCCATCATTATCCCAAGCCCACCTGACTCCTCAATGAGCCCACCTGACTCCTCAATGGGCCCACCTTACTTTGAGCCCAGTCCACCCTACTTTGAGCCCACCCCACCTTTCATAATCCCTTCCCCCACAGGTGGCATTAGCCCAGGCCCACCAACCATAATCCCTTCCCCCACAGAAGGCACTCTCCCAAGCCCACCAAGCACTGTGCCATCCCCCAGTGAAGGCACCATCCCTAGCCCAGGTGTGTTTCAGCCACCTGTGGTGTTCCCTCCACCAAGTGTGCCACCACCACCCAACTATGCCCCAAGGACCACCTTGTGGTGTGTGGCTAAGCCCTCAGTCCCAGACCCAATCATCCAAGAGGCCATGAACTATGCTTGCTGGTCAGGAGCAGATTGCACCTCAATTCAGCCCAATGGGCCCTGCTATCAGCCCGACACTGTCTATGCACATGCTTCATATGCTTTCAATAGTTATTGGCAAAGAACTAAAGGTGCTGGAGGCAATTGCGAGTTTGGAGGAACAGCCATGCTAGTTGCTGTTGACCCTAGCTTCGATGGGTGTCACTTCATCTACAACTGA 1128 0.508 MVMETRRVRKCVMILLLYLTFSAISLTQCDADRSIMRVLRGPKDKRNSTNKNPKKLKTVKHLDENPTIFSSNVEPYSLSSPFSLPPYDSLAPIPLPENSPPFCVFPPPGTPSTTMPTPTGFQPTIPSPPDFYTSPVLPTQNPPPNPLIITPGPPDSFPTPTPEIIPGPPTITPGSPEPVLNPPIIIPSPPDSSMSPPDSSMGPPYFEPSPPYFEPTPPFIIPSPTGGISPGPPTIIPSPTEGTLPSPPSTVPSPSEGTIPSPGVFQPPVVFPPPSVPPPPNYAPRTTLWCVAKPSVPDPIIQEAMNYACWSGADCTSIQPNGPCYQPDTVYAHASYAFNSYWQRTKGAGGNCEFGGTAMLVAVDPSFDGCHFIYN* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0505 375 MobiDBLite consensus disorder prediction 153 258 - -
Pvu5g0505 375 SMART X8_cls 288 372 IPR012946 -
Pvu5g0505 375 MobiDBLite consensus disorder prediction 121 141 - -
Pvu5g0505 375 Gene3D - 284 371 - -
Pvu5g0505 375 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN SUPERFAMILY PROTEIN 218 375 - -
Pvu5g0505 375 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN SUPERFAMILY PROTEIN 11 228 - -
Pvu5g0505 375 MobiDBLite consensus disorder prediction 153 255 - -
Pvu5g0505 375 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 11 228 IPR044965 GO:0004553|GO:0005975
Pvu5g0505 375 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 218 375 IPR044965 GO:0004553|GO:0005975
Pvu5g0505 375 MobiDBLite consensus disorder prediction 115 141 - -
Pvu5g0505 375 Pfam X8 domain 288 359 IPR012946 -
Pvu5g0505 375 PRINTS Proline rich extensin signature 84 96 - -
Pvu5g0505 375 PRINTS Proline rich extensin signature 104 120 - -
Pvu5g0505 375 PRINTS Proline rich extensin signature 126 138 - -
Pvu5g0505 375 PRINTS Proline rich extensin signature 142 163 - -
Pvu5g0505 375 PRINTS Proline rich extensin signature 176 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0505 Pvu-Chr5 5628184 5630342 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0505 289 372 Glycoside Hydrolase AT2G05790 49.412 4.99e-22 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0505 - - pvu:PHAVU_005G048800g 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0505 5 5628184 5630342 Pvu5g0505 5 5628184 5630342 ECH