Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0497 ATGTCTTTGGATTTGCAGCCTGTAGGGGTTGTTGGTGCAATTACACCTTGGAACTTTCCCCTGGCTATGATTACTCGAAAGGTTGGTCCCGCCCTTGCATGTGGCTGTACAGTGGTCGTAAAACCCTCTGAACTTACCCCTCTCACTGCTTTAGCTGCTGCAGAACTCTCCATTCAAGCTGGAATACCAGCGGGTGTCGTGAATGTTGTAATGGGAAATGCTCCTGATATTGGGGACGCTTTACTTGCAAGTCCACAGGTAAGGAAGATCACATTCACAGGCTCAACGGCTGTTGGAAAGAAATTAATGGCTGGGTCAGCTGAGACAGTTAAAAGAGTATCTTTGGAACTTGGTGGCAACGCGCCTTGCATTATTTTTGATGATGCTGACCTTGATGTTGCAGTAAAAGGAACTCTTGCAGCAAAGTTCCGTAATAGTGGACAAACATGCGTTTGTGCCAATAGAATTATTGTACAAGAAGGTATATACGAGAAATTTTCAAATGCACTTTGTGATGCTGTTCAGAGTATGAAAGTTGGGGATGGTTTTAGTGAAGGTGTGACACAGGGCCCTCTAATCAATGAAGCTGCTGTAGAAAAGGTTGAGTCCTTAATTCATGATGCTACATCAAAGGGGGCAAAAGTAATTACTGGGGGTAAAAGACATAGCCTTGGATTTACTTTTTATGAACCAACGGTGATCACTGATGTCAACAATGAGATGCGCATATCCAGAGAGGAAGCATTTGGACCTGTTGCACCCCTTTTGAGATTCAAAACTGAAGAGGATGCTATCAGAATTGCTAACGACACCAACGCAGGTTTGGGTTCATACGTCTTTACAAACAGTATCCAACGATCATGGCGTGTTGCTGAAGCTCTAGAATATGGACTTGTAGGTGTTAATGAAGGAGTATTTTCAACTGAGGTGGCTCCTTTCGGTGGTTTTAAACAGTCGGGGCTTGGAAGAGAAGGCTCCAAATATGGAATGGATGAATATTTAGAGATAAAATATGTCTGCTTGGGAAACATGAACAAAGAATGA 1044 0.432 MSLDLQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVVKPSELTPLTALAAAELSIQAGIPAGVVNVVMGNAPDIGDALLASPQVRKITFTGSTAVGKKLMAGSAETVKRVSLELGGNAPCIIFDDADLDVAVKGTLAAKFRNSGQTCVCANRIIVQEGIYEKFSNALCDAVQSMKVGDGFSEGVTQGPLINEAAVEKVESLIHDATSKGAKVITGGKRHSLGFTFYEPTVITDVNNEMRISREEAFGPVAPLLRFKTEEDAIRIANDTNAGLGSYVFTNSIQRSWRVAEALEYGLVGVNEGVFSTEVAPFGGFKQSGLGREGSKYGMDEYLEIKYVCLGNMNKE* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0497 347 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 119 308 IPR016163 GO:0016620
Pvu5g0497 347 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 115 122 IPR029510 GO:0016491
Pvu5g0497 347 CDD ALDH_F5_SSADH_GabD 6 341 - -
Pvu5g0497 347 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 143 154 IPR016160 GO:0016491
Pvu5g0497 347 SUPERFAMILY ALDH-like 5 345 IPR016161 GO:0016491
Pvu5g0497 347 Pfam Aldehyde dehydrogenase family 5 339 IPR015590 GO:0016491
Pvu5g0497 347 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 6 344 - -
Pvu5g0497 347 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 6 344 - -
Pvu5g0497 347 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 6 333 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0497 Pvu-Chr5 5501199 5515494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0497 6 347 Aldehyde Dehydrogenase Gene Family AT1G79440 82.164 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0497 K17761 - gmx:100808318 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0497 5 5501199 5515494 Pvu5g0497 5 5501199 5515494 ECH