Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0473 ATGGCTGCTCAATTGCAAAACTCTGCAGATGAAATGATGAAGAAGCTTCATGGTGATTCTTCAGCGGCTGAACTCAATAATTCCAATACGGTTCCTTCGAAGGGTGCAAGTTCCCCATCTGATGCAAGATCATGTGTATCATCCATAGGAGATGCTTCTGGTAGTGTTAAGGATGTTGATGTGGATCATGAGTACTTGTCCACAGATCAGGGTGCTCCTTATCCTGCTGGTGGCTATTATGGTTACTACTATCCAGGTTATGGTGGTTTCTTTGGAGAGTCAGACAACCAAGGGTATTATGTTGGTGCGGATGCCATGGATCTTCAGTACCCTGTCATGCAAGCAGATAATGGATCTTATGTCTATATCGTGCCAGGATTTCAGACTGGCTACCCTTCATACTTTCCTATAGGTACAGCTGGTGTTGAAGGACAGTATAATGTCTACCACCCTGGATCCATCTTTCAACACCCAATTGGATCACCTGGTTATTTTCCAGCTTCTCTATCATATGGAGAATTACCACCATCAACATACTCATGGGATTCTTCTCTAATCACACAAGATGGGTTACAAGGACATGGTTATAATGAACTGCCTGGTAAACCAAATGGTAGATCTAATTTGTCTTCCCACAGTCATTCTGGTGGTATTGTATCAAAGTCTTCACCCTCCTCTAACTCGGCAGAAGTGAAGGGTTCAACACCATTATTGGAGGTCTCATCAACTCATGTTAAGAGAAACCAGCCAAAACAAACAAACAAAGCACCTGTTTCAGTCCTCCATTCACCTGTTGCCAAGTTTCCCACATACAATCAAGGAAAGACTGGATTCCTCTATCCAAACAACTTGCTTAGTGTAAAAACAAATACAAAGGGCTGGGTTAGTACTGATAAGTTGAAAAACAGAAACAAGGTCAATGATTCTCTTAATGAGCAGAATCAAGGTCCTAGAACAGCTAATGCAAAAGGTGCATTAGTGTCTGGTGGTAATTCTGTGAGAAACTTGGCCCTAGGTGGGAGTGGAAATGTTACCAGCAAAATCAGGACAGATCAATACAACCTTCCTGATTTTCCAACCAAATATGACCATGCACTTTTCTTTGTCATCAAATCATACAGTGAAGATGATATCCACAAGAGCATCAAATACAACGTGTGGGCAAGTACTCCTAATGGGAACAAGAGGCTGGATGGTGCATTTCAGGATGCACAGAAGAGAATGGAGGAGAAAGGATGCAAGTGCCCTGTGTTCCTTTTCTTTTCGGTCAATGCTAGTGGTCAATTTTGTGGAGTGGCTGAGATGACTGGTCGAGTTGATTTCAACAAAAGTATGGATTTCTGGCAACAAGATAAATGGAATGGATATTTCCCTGTCAAATGGCACATTATAAAGGATGTTCCAAATCCTCAACTACGGCACATAATACTTGAGAATAATGATCACAAGCCCGTCACAAATAGTAGAGACACACAAGAGGTGAACTTTCCCCAAGGTGTTGAAATACTCAACATTTTCAAGAACTATGTGGCAAGAACTTCCATATTGGATGACTTTGAGTTTTACGAAAGCCGCCAAAAGGTCTTGCAGGAGAAGAAAACAAGGCAATCTATGCCCCATACCAGTATACAGCATGTAGATGAATTAACCACAACACTAGGGTCAGTAGAGCTATCATCATATGTGAAGAACAATGATCCCAAGGTGGTTGAGAAAGTGAAGGACTGA 1728 0.4178 MAAQLQNSADEMMKKLHGDSSAAELNNSNTVPSKGASSPSDARSCVSSIGDASGSVKDVDVDHEYLSTDQGAPYPAGGYYGYYYPGYGGFFGESDNQGYYVGADAMDLQYPVMQADNGSYVYIVPGFQTGYPSYFPIGTAGVEGQYNVYHPGSIFQHPIGSPGYFPASLSYGELPPSTYSWDSSLITQDGLQGHGYNELPGKPNGRSNLSSHSHSGGIVSKSSPSSNSAEVKGSTPLLEVSSTHVKRNQPKQTNKAPVSVLHSPVAKFPTYNQGKTGFLYPNNLLSVKTNTKGWVSTDKLKNRNKVNDSLNEQNQGPRTANAKGALVSGGNSVRNLALGGSGNVTSKIRTDQYNLPDFPTKYDHALFFVIKSYSEDDIHKSIKYNVWASTPNGNKRLDGAFQDAQKRMEEKGCKCPVFLFFSVNASGQFCGVAEMTGRVDFNKSMDFWQQDKWNGYFPVKWHIIKDVPNPQLRHIILENNDHKPVTNSRDTQEVNFPQGVEILNIFKNYVARTSILDDFEFYESRQKVLQEKKTRQSMPHTSIQHVDELTTTLGSVELSSYVKNNDPKVVEKVKD* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0473 575 MobiDBLite consensus disorder prediction 192 258 - -
Pvu5g0473 575 MobiDBLite consensus disorder prediction 306 326 - -
Pvu5g0473 575 Pfam YT521-B-like domain 367 507 IPR007275 GO:0003723
Pvu5g0473 575 MobiDBLite consensus disorder prediction 21 51 - -
Pvu5g0473 575 Gene3D ph1033 like domains 343 521 - -
Pvu5g0473 575 PANTHER OS01G0679900 PROTEIN 3 542 - -
Pvu5g0473 575 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 3 542 IPR045168 -
Pvu5g0473 575 MobiDBLite consensus disorder prediction 203 258 - -
Pvu5g0473 575 MobiDBLite consensus disorder prediction 307 326 - -
Pvu5g0473 575 ProSiteProfiles YTH domain profile. 365 506 IPR007275 GO:0003723
Pvu5g0473 575 MobiDBLite consensus disorder prediction 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0473 Pvu-Chr5 4866485 4871433 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0473 K20102 - gmx:100791190 1017.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0473 5 4866485 4871433 Pvu5g0473 5 4866485 4871433 ECH