Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0463 ATGATGCCAGGCAATGGACAGTTAACAGTTCCTCCTGGCTTCAGGTTCCACCCTACTGATGAGGAGCTTCTCTACTATTACCTGAGGAAGAAAGTTTCTTATGAAGCCATTGATCTTGATGTCATAAGAGAAGTGGATCTCAACAAACTTGAGCCTTGGGACCTCAAAGACAAATGTAGGATTGGGTCAGGGCCTCAGAATGAGTGGTATTTCTTCAGCCACAAGGATAAGAAATACCCGACAGGAACAAGAACAAATCGAGCAACTACAGCTGGTTTTTGGAAAGCAACTGGAAGGGACAAGGCCATATACCACACTAATTCCAAGAGGATTGGCATGAGGAAAACCCTAGTTTTCTACACTGGTCGTGCTCCTCATGGCCAGAAGACTGATTGGATCATGCACGAGTATCGCCTTGATGAAGATGATACTGATGTTCAGGAAGATGGATGGGTGGTATGCAGGGTTTTCAAAAAGAAAAACCAAAATCGAGGTTTCCAGCAAGAAATTGAAGAAGAAGAAAACATAACCCACATGAGAACAAGTGGTCCTTGCCATGTTCTAGAGCCAAAACATCACATGCAAGGAGGACTATATGAGTACAATTTTGATGGCACAATGCACCTTCCACAGTTGTTCAGTCCAGAAACAGCTGTTGCACCAACCACTACTTCCTTGGCCACATCCATGAATGCCATGGACATCCTTGAGTGCTCTCAAAACTTGTTGAGGCTCACAACTACTGGCTGTGGACTCAATCTTATGCAACAACAAGGAGAGAGGTTCAGTGGTGACTGGTCATTCTTGGACAAGCTTCTAGCATCCCACCATGGCATGGATCATCACCATCATCCACAAACCAAATGTAACCCTCCCACTCACCAAGCTGCAACTTCTGTTGCCACTTCAGCTCACAAATTCCCATTCCATTACCTTGGTGGTGACACCCATGATATCATGAAATTTTCCAAGTAG 975 0.4472 MMPGNGQLTVPPGFRFHPTDEELLYYYLRKKVSYEAIDLDVIREVDLNKLEPWDLKDKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIYHTNSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLDEDDTDVQEDGWVVCRVFKKKNQNRGFQQEIEEEENITHMRTSGPCHVLEPKHHMQGGLYEYNFDGTMHLPQLFSPETAVAPTTTSLATSMNAMDILECSQNLLRLTTTGCGLNLMQQQGERFSGDWSFLDKLLASHHGMDHHHHPQTKCNPPTHQAATSVATSAHKFPFHYLGGDTHDIMKFSK* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0463 324 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 301 - -
Pvu5g0463 324 PANTHER NAC (NO APICAL MERISTEM) DOMAIN TRANSCRIPTIONAL REGULATOR SUPERFAMILY PROTEIN-RELATED 6 301 - -
Pvu5g0463 324 SUPERFAMILY NAC domain 5 159 IPR036093 GO:0003677|GO:0006355
Pvu5g0463 324 ProSiteProfiles NAC domain profile. 10 159 IPR003441 GO:0003677|GO:0006355
Pvu5g0463 324 Gene3D NAC domain 19 164 IPR036093 GO:0003677|GO:0006355
Pvu5g0463 324 Pfam No apical meristem (NAM) protein 11 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0463 Pvu-Chr5 4613761 4616889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0463 2 324 NAC Transcription Factor Family AT1G79580 52.926 1.22e-117 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu5g0463 NAM 2.2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0463 - - gmx:100815632 585.489