Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0455 ATGCCTGATTTACCACCTGAGATGAGCTACAATGTGTCAGAAGAGGCACACCCTAGTGCTCATAGCAGTTGTGCAAATTCAGGAAAGAACTCACCAACTCATCCCAATAATGTGAACCAAACAGAAAAAGAGACCTTTACAGCAAAAACTGTCCACAATTCAGGAAGTGAAACTGGACACTTAGACCATGTTTCAAAACCTGATAATGCAAAGTTGGAAGGTAGATCAAGGCCCCAGAGGCTAATCCCACCAAACAGGAACATTTCTGACTTCAACCAACACCAAAGTCCAAGGACAACAAAGAAGCCTAGTTCAAACCCTGATCACCATCATTCAAAGACAATGTCTGTATCAACCCCACATGCAAAGACCCCTGGGAGTGGTGCTAGTTCTCGCAGTGACAGCTTAGAGAGCACAAGTGCACCCATTAGGCCACACACTGGGGGTGATGTGAGGTGGGAAGCTATCAACATGGTTTCAAGGTGTGGCCCTCTCAATCTCAGCCACTTCAGGCTTCTCAAGCGCATTGGTTATGGAGACATTGGGAGTGTGTACCTTGTGGATCTCAAAGGGACCAGGACCTACTTTGCCATGAAAGTAATGGACAAGGCAGCCCTCATAAGCAGAAATAAGCTTCTGAGGGCGCAGACAGAAAGGGAGATTCTTGGACTCCTTGACCACCCCTTTCTCCCAACTTTGTATTCTTACTTTGAAACTGACAAGTTTTACTGTCTGGTGATGGAGTTTTGTAGTGGAGGTGATCTTCATTCTCTTCGACAGAAGCAACCTAACAAGTGTTTCCCTGAAGAAGCTGCCAGGTTTTATGCTTCAGAGGTTTTGCTAGCTCTGGAGTACCTGCACATGCTGGGCATTGTATACAGAGACTTAAAACCAGAAAATCTTCTAGTGAGAGATGAAGGGCACATCATGCTCTCAGATTTTGACTTATCCCTTCGCTGCTCCGTCAGTCCTACACTAGTTAAGTCTTCATCTGCTCATGCAAGCAACAATAGTGGTGGCAACAATGACTCCAGTGGCGTACTAAGTGATGACCAAGCAGTGTCAAGCACTACTCAAGCATCAAGTTTTTTTCCGCGCATTTTGCCTTCAAAGAAAAACCGCAAGGCAAAGTCAGATTTTGGCCTATTGGTTGGCGGAGCACGCCTTCCTGAACTGATGGCAGAACCCACCAATGTGAGATCAATGTCATTTGTAGGAACACATGAGTATCTTGCTCCAGAGATAATCAAAGGAGAGGGTCATGGTAGTGCAGTAGATTGGTGGACTTTTGGGATCTTCTTGTATGAGCTGTTGCATGGAGCAACCCCTTTCAAGGGTGCAGGGTATAAAGCCACACTTTTTAATGTTGTTGGACAACCACTTAGGTTCCCAGAAACTCCCCAGGTCAGTGCAGTGGCTCGTGACCTTATTAGGGGATTGCTGGTGAAAGAGCCTCAGAAAAGAATTGCATATAAAAGAGGAGCTACAGAGATAAAACAACACCCATTTTTTGAGGGAATGAACTGGGCTCTAGTTAGAAGTGCCACACCTCCTCACATACCAGATGCTATAGACTTCTCCAAGTATGCTAGCAAAGAGTCAGCACCCCCAGTGGACAAGAAGATGGCAGATATTGCTAATGATAAAAACAGCACTAATGCTAATGATTCTTACATAGATTTTGAGTATTTTTAG 1695 0.4501 MPDLPPEMSYNVSEEAHPSAHSSCANSGKNSPTHPNNVNQTEKETFTAKTVHNSGSETGHLDHVSKPDNAKLEGRSRPQRLIPPNRNISDFNQHQSPRTTKKPSSNPDHHHSKTMSVSTPHAKTPGSGASSRSDSLESTSAPIRPHTGGDVRWEAINMVSRCGPLNLSHFRLLKRIGYGDIGSVYLVDLKGTRTYFAMKVMDKAALISRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGDLHSLRQKQPNKCFPEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLVRDEGHIMLSDFDLSLRCSVSPTLVKSSSAHASNNSGGNNDSSGVLSDDQAVSSTTQASSFFPRILPSKKNRKAKSDFGLLVGGARLPELMAEPTNVRSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLHGATPFKGAGYKATLFNVVGQPLRFPETPQVSAVARDLIRGLLVKEPQKRIAYKRGATEIKQHPFFEGMNWALVRSATPPHIPDAIDFSKYASKESAPPVDKKMADIANDKNSTNANDSYIDFEYF* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0455 564 SUPERFAMILY Protein kinase-like (PK-like) 167 528 IPR011009 -
Pvu5g0455 564 PANTHER FLIPPASE KINASE 1-RELATED 24 564 - -
Pvu5g0455 564 MobiDBLite consensus disorder prediction 82 102 - -
Pvu5g0455 564 Pfam Protein kinase domain 395 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0455 564 Pfam Protein kinase domain 171 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0455 564 ProSiteProfiles Protein kinase domain profile. 170 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0455 564 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672|GO:0006468
Pvu5g0455 564 MobiDBLite consensus disorder prediction 59 75 - -
Pvu5g0455 564 MobiDBLite consensus disorder prediction 15 58 - -
Pvu5g0455 564 Gene3D Transferase(Phosphotransferase) domain 1 398 522 - -
Pvu5g0455 564 MobiDBLite consensus disorder prediction 110 142 - -
Pvu5g0455 564 Gene3D Phosphorylase Kinase; domain 1 168 253 - -
Pvu5g0455 564 MobiDBLite consensus disorder prediction 330 351 - -
Pvu5g0455 564 SMART serkin_6 170 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0455 564 CDD STKc_phototropin_like 168 525 - -
Pvu5g0455 564 MobiDBLite consensus disorder prediction 1 147 - -
Pvu5g0455 564 Gene3D Transferase(Phosphotransferase) domain 1 254 324 - -
Pvu5g0455 564 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 24 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0455 Pvu-Chr5 4427848 4430607 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0455 61 564 AGC Kinase Gene Family AT1G79250 66.284 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pvu5g0455 Pkinase 8.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0455 - - gmx:100784301 962.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0455 5 4427848 4430607 Pvu11g1878 11 45655282 45658176 PCT