Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0453 ATGGATGCTAGAGAGGAGTCTCCGGCGCCGGCAACATCACCGCCCGTGATACACCCGGCGGTGGTACCACTCTCCTTCCTTCTGGGCACTTGGAGGGGCCAAGGAGAAGGAGGCTTCCCCACTATAAATTCCTTCTCCTATGGCGAAGAGCTTATCTTCTCCCATTCCCCCAACAAGCCTGTGATAGGGTACACTCAGAAGACATGGAAACTCAGCTCTGGAGAGCCTATGCACGGTGAGAGTGGATACTGGCGTCCTAAACCTGATGGCACCATTGAAGTTGTGATTGCCCAAAGCAATGGTCTTGTGGAAGTTCAGAAAGGGATATACAGCTTTGAAGAGAATGTGATACAACTTCAGAGTGAAATGGTGGGGAATGCTTCTAAGGTTAAAGAGATAAGAAGATGTTTTCAGCTGGTTGATGGGGTTCTTTGTTATGATGTTCAGATGGCTACCAACACAGTAACTCTTCAACCACACTTGAAAGCAACACTGAAGAAGCTCTAA 507 0.4832 MDAREESPAPATSPPVIHPAVVPLSFLLGTWRGQGEGGFPTINSFSYGEELIFSHSPNKPVIGYTQKTWKLSSGEPMHGESGYWRPKPDGTIEVVIAQSNGLVEVQKGIYSFEENVIQLQSEMVGNASKVKEIRRCFQLVDGVLCYDVQMATNTVTLQPHLKATLKKL* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0453 168 SUPERFAMILY Lipocalins 17 167 IPR012674 -
Pvu5g0453 168 CDD lipocalin_heme-bd-THAP4-like 21 167 IPR014878 -
Pvu5g0453 168 PANTHER THAP4 PROTEIN 5 167 IPR045165 -
Pvu5g0453 168 Pfam THAP4-like, heme-binding beta-barrel domain 21 167 IPR014878 -
Pvu5g0453 168 Gene3D - 15 168 IPR012674 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0453 - K23205 gmx:100306509 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0453 5 4416792 4419652 Pvu5g0453 5 4416792 4419652 ECH