Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0393 ATGGGTACTCCTGCAGTTGAACACATTTCAGAATGTTTTGTGAAGCCTCACCCCTGCAACAACTTCCCCAACCAAATCTACAATCTAACACCATGGGATATTGCCATGTTGTCTGTGAGCTATATCCAGAAGGGTTTGCTCTTCAGCAAGCCTGCAACTCTTGAGAATCAACAACATTTCATGGAGAATCTGTTGGAGAAGCTCAAACACTCTCTTTCTCTCACCCTCTCCCATTTCTATCCACTCTCTGGTCGTCTTGTCACCCACAAAACCCAACACCCTCCCTCTTACACTGTTTCTGTTGATTGCAGCAACAGTGATGGAGCTCGATTCATCCATGCAGCCTTAGATGCCACCATATCTGACCTACTCTCCCCACTTGACACCCCTTCCATTTTTCACTCGTTCTTCGACCACCACAAAGCACTCAACCACGACGGTCACACCATGCCCTTGTTGTCCATCCAAGTCACCGAACTACTGGATGGTGTTTTCATAGGTTGCTCCATGAATCACTCTATAGCAGATGGCACTTCGTTTTGGAACTTCTTCAATACATGGTCGCAGATCTTTCAAGCACAGTCTCAGGCTGAAAGCCATGAACACGATGCTCCCATCTCACATCAACCCCTTCGTTTGTTTCCAAATAATTCTGGTCCACCAATCTCTCTTCCTTTCAAACACCACGACGAGTTTATCAAGAGATTTGAAGCGCCCTTGCTGAGAGAGAGAGTCTTCCATTTTTCAGCAGAGTCCATAGCGAAACTGAAAGCCAAGGCCAACTCAGAAGCTAACACCACAAGAATCTCTTCTTTCCAGTCATTATCAGCATTTGTTTGGAGATCGATAACCCGTGCGCGCTCCCCACCGTCTGAGCAGAAAACAAGTTGCAGATTAATGGCAAACATTCGATCAAGAATGGAGCCGCCACTGGCTGAAGAATACTTTGGAAACTGCATTCATGTACTGAGAGCAGAAACGACAACAGGAGAATTGCTTGAGAATGGTCTAGGATGGGCAGCATGGAAGCTGCATGTGGCTGTTACAAACCTTAACGAAGTGGTGTTAGAATTTCTGGAAAGATGGTTAGAGTCTCCTTTGATAATTCAAACGGGTCGTTTCTCTGACTCGTGCAGCGTGTTGACGGCAAGCTCGCCGAGGTTCAATATGTATGGGAGTGAATTTGGAATGGGGAAAGCGGTGGCTGTAAGAAGTGGGTGTGCAAATAAATTTGATGGGAAACTGACATCATACGCAGGGCGTGAAGGAGGAGGAAGCATTGATTTGGAAGTTTGCCTTTTGCCACATACGATGAGTGCTTTGGAATCAGACAAGGACTTCATGAATGCAGTTTCTGTCTTCGAAAATGGTCATAAAGGGACAGATCTTAATTAA 1395 0.4573 MGTPAVEHISECFVKPHPCNNFPNQIYNLTPWDIAMLSVSYIQKGLLFSKPATLENQQHFMENLLEKLKHSLSLTLSHFYPLSGRLVTHKTQHPPSYTVSVDCSNSDGARFIHAALDATISDLLSPLDTPSIFHSFFDHHKALNHDGHTMPLLSIQVTELLDGVFIGCSMNHSIADGTSFWNFFNTWSQIFQAQSQAESHEHDAPISHQPLRLFPNNSGPPISLPFKHHDEFIKRFEAPLLRERVFHFSAESIAKLKAKANSEANTTRISSFQSLSAFVWRSITRARSPPSEQKTSCRLMANIRSRMEPPLAEEYFGNCIHVLRAETTTGELLENGLGWAAWKLHVAVTNLNEVVLEFLERWLESPLIIQTGRFSDSCSVLTASSPRFNMYGSEFGMGKAVAVRSGCANKFDGKLTSYAGREGGGSIDLEVCLLPHTMSALESDKDFMNAVSVFENGHKGTDLN* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0393 464 Gene3D - 233 443 IPR023213 -
Pvu5g0393 464 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 451 - -
Pvu5g0393 464 Pfam Transferase family 6 447 - -
Pvu5g0393 464 Gene3D - 7 218 IPR023213 -
Pvu5g0393 464 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0393 Pvu-Chr5 3687682 3689229 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0393 66 442 Monolignol Biosynthesis Gene Families AT5G48930 27.160 1.93e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0393 - - vra:106761257 723.005