Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0358 ATGGATGATGGAAATGCTGAGCTTTCTGATAAGCTTTCGAATAATGTTCTATTTTTGAATCCAGAGTCATCTAGCAGTTTTCAGGCTTCAGCATCCGTGAACACAGTTCCTGAATTATGTAGGAGTAGCAGCAGAACATGCACCCACACTCACACATGCAACCCACCTGGCCCTGATGCTGCTCACACACACACATGCTATCACTCTCACACCCAAATTTTTGGACCTGAAGATGATGACGACAAGGAGCACACCAACTCCAAACCAAAAAGGCCTTCTGGCAACCGAGAAGCAGTTAGGAAGTATAGGGAGAAGAAGAAGGCACACACAGCATACTTGGAGGAGGAAGTTAAGAAATTGCGTTTGGTGAATCAGCAACTAGCGAGGAAACTACAAGGGCAGGCACATCTTGAAGCAGAACTGGCAAGGTTGAGGAGCATTTTGGCACTCCTTAAGGGGAAAATAGACAGTGAATTGGGTGCTTTCCCCTTTCAAAATCAGTGTAGCTCTTACATTCTCAAAGAAGGGGATGCTGGTTTGCTGTCTACTGCAGGGACAATTGGCCTTCGGTGTCAGAACGGCTTGCCATGCTTCCATCCTCATGCAGGATCATCATCCCAGGTCAACATTTGTGCATATGGAAAGTCTGTGAGTCCATGGGAAGGAAACTGCCAACCTGAAATTGTAGATTGTCATGTAGATGCAAATAACTTGATGAGTACTGAAGGACAAACTGTGGAGACAGTGGATAACTTCTTGTCATCTGCATCTCAAGAGGGATAG 783 0.4559 MDDGNAELSDKLSNNVLFLNPESSSSFQASASVNTVPELCRSSSRTCTHTHTCNPPGPDAAHTHTCYHSHTQIFGPEDDDDKEHTNSKPKRPSGNREAVRKYREKKKAHTAYLEEEVKKLRLVNQQLARKLQGQAHLEAELARLRSILALLKGKIDSELGAFPFQNQCSSYILKEGDAGLLSTAGTIGLRCQNGLPCFHPHAGSSSQVNICAYGKSVSPWEGNCQPEIVDCHVDANNLMSTEGQTVETVDNFLSSASQEG* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0358 260 Gene3D - 76 151 - -
Pvu5g0358 260 MobiDBLite consensus disorder prediction 71 106 - -
Pvu5g0358 260 SUPERFAMILY Leucine zipper domain 90 134 IPR046347 GO:0003700|GO:0006355
Pvu5g0358 260 SMART brlzneu 83 150 IPR004827 GO:0003700|GO:0006355
Pvu5g0358 260 PANTHER BASIC LEUCINE ZIPPER 23 1 233 - -
Pvu5g0358 260 MobiDBLite consensus disorder prediction 73 101 - -
Pvu5g0358 260 CDD bZIP 95 142 - -
Pvu5g0358 260 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 233 - -
Pvu5g0358 260 Pfam Basic region leucine zipper 87 140 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0358 1 165 bZIP Transcription Factor Family AT2G16770 53.333 8.72e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu5g0358 bZIP_2 3.6e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0358 5 3212439 3214320 Pvu5g0358 5 3212439 3214320 ECH