Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0352 ATGGCTAAGAAAGGTTGGTTTAGCATGATTAAGAAGATCTTTTTATGGGGGGCACAGTCCTCACCAACGAAGAAGGAAAAAAGAAGGGTGTGGATATTTGGGAGGGTTAAGACCAAGAGATTGCCTTCAATTACAGCTCCACCACTCTCTAAAGAAACGAGACTAAGTGAAGCTGAAGAAGAACACAACAAGCATGCTTTAACAGTGGCCATTGCTTCAGCTGCTGCTGCTGAAGCTGCCATTACTGCTGCTCAGGTTGCTGTCGAGGTTGTCAGGCTCCAATCAGCTCATCAACAACTTAATGAAAAACAAGAACAGCTTCAACCTATCAGAACTAGGCATGATGCTCCTCATTCCACACACCACTGCCAGAGGAAGATGGAAGAATCTTCAGCCATCAAAATTCAAACAGCATTTAGAGGTTACCTATCAAGGAAAGCTTTGAGAGCATTGAAGGGAATAGTGAAGCTTCAAGCTATCATTCGTGGAAGAGCTGTGAGACGCCAAGCTTTGTGCACTCTGAAGTGCTTGGAGTCCATAGTAAGTATCCAGTCACATGTCTTTGCAAGGAGACTCCAAATGGTTGAAGGAAAATGGGAATGTGGTGAACATGAAGATACAGAAGGTTCAAGAGACAAGATAATAAGGATGGACTCAAACAGTGAGAGAAGGTGGGATGACAGCATGTTGTTGAAGGAAGAGGTAGATGCCTCTTGCATGAGCAAGAAAGAAGCAGTTGTTAAGAGAGAAAGAGTAAAAGAATACTCATTTAACCACAGAAAGTCAGCTGAATCAGAAAGAGATAAGATAAATGGAAGATGGAGGTACTGGATGGAGCAGTGGGTAGACACACAACTTTCCAAGAGTAAAGAACTTGAAGATTTAGACTCAGTTTTCAGCTCACATCACTCTAGAACTGGGAAGGAAAGTGGAAAGAGACAACTAAAGCTAAGAAATACTCAGATACAAAATCAGGTTGAAGGATTAGATTCTCCAGCACTTTCTTCAAGGAACACATTTCCCCACAGGAGCCAGACTTCAGAGGCAGAAAATCACTCATTCCCAAGCTCACCTGCAATTCCTACATATATGGCTGCAACAAAATCAACACAAGCAAAAGCAAGATCAACAAGCTCCCCAAGAGCAAGGACAGGAGGGAATTTTGACATGAACTCTGATAGCTATTCACCATGCAAGAAAAAGTTACCACTTGTGACTTCTCTTAATCAGCAAAGATCTCCTAGCTTAAAGGGCATTCCTAGACCTCTGAAATTAAGTCAGACATTGAGGGATCTCAGCATTAACTCAGATTGTTCAGTGCCAATTAGAGATCAAGAAAGTTGCTTCAAATGA 1353 0.4213 MAKKGWFSMIKKIFLWGAQSSPTKKEKRRVWIFGRVKTKRLPSITAPPLSKETRLSEAEEEHNKHALTVAIASAAAAEAAITAAQVAVEVVRLQSAHQQLNEKQEQLQPIRTRHDAPHSTHHCQRKMEESSAIKIQTAFRGYLSRKALRALKGIVKLQAIIRGRAVRRQALCTLKCLESIVSIQSHVFARRLQMVEGKWECGEHEDTEGSRDKIIRMDSNSERRWDDSMLLKEEVDASCMSKKEAVVKRERVKEYSFNHRKSAESERDKINGRWRYWMEQWVDTQLSKSKELEDLDSVFSSHHSRTGKESGKRQLKLRNTQIQNQVEGLDSPALSSRNTFPHRSQTSEAENHSFPSSPAIPTYMAATKSTQAKARSTSSPRARTGGNFDMNSDSYSPCKKKLPLVTSLNQQRSPSLKGIPRPLKLSQTLRDLSINSDCSVPIRDQESCFK* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0352 450 Pfam Protein of unknown function (DUF4005) 346 404 IPR025064 -
Pvu5g0352 450 MobiDBLite consensus disorder prediction 298 317 - -
Pvu5g0352 450 Gene3D iswi atpase 123 152 - -
Pvu5g0352 450 SMART iq_5 127 149 IPR000048 GO:0005515
Pvu5g0352 450 ProSiteProfiles IQ motif profile. 128 156 IPR000048 GO:0005515
Pvu5g0352 450 ProSiteProfiles IQ motif profile. 152 179 IPR000048 GO:0005515
Pvu5g0352 450 Pfam IQ calmodulin-binding motif 130 149 IPR000048 GO:0005515
Pvu5g0352 450 MobiDBLite consensus disorder prediction 298 315 - -
Pvu5g0352 450 PANTHER IQ-DOMAIN 5-RELATED 1 436 - -
Pvu5g0352 450 MobiDBLite consensus disorder prediction 323 395 - -
Pvu5g0352 450 MobiDBLite consensus disorder prediction 323 394 - -
Pvu5g0352 450 PANTHER IQ-DOMAIN 11 1 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0352 Pvu-Chr5 3106917 3109736 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0352 3 450 IQD Protein Family AT5G13460 42.276 5.59e-98 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0352 - - gmx:100794802 682.945