Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0343 ATGAGGGAGCTGAGATGGGACTCCCAGGGATTAAATCCAATAAGCCTTCTCATTGACTGTGCCAAATGTGTTGCATCTGGAAGCATTAAGAATGCAGATATTGGCCTTGAGTACATATCTCAGATTTCATCTCCTGATGGTAATGCAGTGCAGAGGATGGTGAGTTATTTCAGTGAAGCACTTGGATACAGGATAATAAAACATTTGCCAGGTGTATACAAATCTATCAATCCCTCAAAAACATCACTATCTTCAGAAGATATCCTTGTTCAGAAATACTTCTATGAATTGTGTCCCTTTTTGAAGTTTTCATACCTGATCACAAACCAAGCCATTGTGGAGGCCATGGAATGTGAAAAGGTGGTTCATATTATTGATCTCCATTGTTGTGAGCCAGCTCAATGGATAGATCTTCTACTCACTTTCAAAAACCGTCAGGGAGGTCCACCCCATCTGAAAATTACAGGCATTCATGAGACGAAAGAAGTCTTAGACCAGATGAACTTTCATTTGACATCTGAAGCTGGGAATTTGGATTTTCCTTTACAGTTCTATCCAGTTGTTAGCAAACTAGAAGATGTTGACTTTGAGAAGTTGCCTGTTAAGACAGGAGATGCTATTGCAATAACTTCAGTTCTTCAGCTGCATTCGCTTCTTTCCACTGATGATGACATGGCAGGAAGAATCTCCCCAGCCGCAGCAGCATCTATGAATCTGCAGAGAGCAGTGCATATGGGGCAAAGAACTTTTGCTGAGTGGCTTGAGAGAGATATGATCAATGCATATATCTTGAGTCCTGATTCTGCATTGTCACCTCTTTCCTTTGGTGCCTCACCTAAGATGGGGATTTTTCTGAACGCCATGAGAAAGCTCCAACCAAAACTGGTAGTGGTTACTGAACAAGAATCAAATCTGAATGGATCAAATTTGATGGAGAGAGTTGATAGAGCATTGTACTTTTACAGTGCCTTGTTTGACTGCTTGGACTCTACTGTAATGAGAACATCAGTTGAGAGGCAAAAACTTGAGAGGATGCTTCTTGGAGAACAGATAAAAAACATCATTGCTTGTGAGGGAGTTGATAGAAAAGAAAGACATGAGAAACTCGAAAAATGGATTCGAAGGCTTGAAATGGCTGGTTTTGTAAAGGTACCTTTGAGCTACAATGGGAGGATAGAAGCAAAGAATCTGTTGCAGAGATATAGTAGTAAATACAAATTTAGAGAAGAGAATGATTGTTTGCTTGTCTGCTGGAGCGATAGGCCATTGTTTTCTGTATCAGCTTGGAGTTTTAAGAGATGA 1302 0.404 MRELRWDSQGLNPISLLIDCAKCVASGSIKNADIGLEYISQISSPDGNAVQRMVSYFSEALGYRIIKHLPGVYKSINPSKTSLSSEDILVQKYFYELCPFLKFSYLITNQAIVEAMECEKVVHIIDLHCCEPAQWIDLLLTFKNRQGGPPHLKITGIHETKEVLDQMNFHLTSEAGNLDFPLQFYPVVSKLEDVDFEKLPVKTGDAIAITSVLQLHSLLSTDDDMAGRISPAAAASMNLQRAVHMGQRTFAEWLERDMINAYILSPDSALSPLSFGASPKMGIFLNAMRKLQPKLVVVTEQESNLNGSNLMERVDRALYFYSALFDCLDSTVMRTSVERQKLERMLLGEQIKNIIACEGVDRKERHEKLEKWIRRLEMAGFVKVPLSYNGRIEAKNLLQRYSSKYKFREENDCLLVCWSDRPLFSVSAWSFKR* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0343 433 ProSiteProfiles GRAS family profile. 4 430 IPR005202 -
Pvu5g0343 433 Pfam GRAS domain family 14 429 IPR005202 -
Pvu5g0343 433 PANTHER TRANSCRIPTION FACTOR GRAS, SCARECROW-LIKE PROTEIN 3-RELATED 2 431 - -
Pvu5g0343 433 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 431 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0343 Pvu-Chr5 3032561 3033862 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0343 1 433 GRAS Transcription Factor Family AT1G50420 50.113 3.01e-151 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu5g0343 GRAS 2.4e-118 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0343 - - gmx:106798410 824.313