Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0337 TCTGAGATTGCTTCTCAACTTCCATTTCAGCACAAGAAACTACCCCAAAGGCTTGATCGCATGCTGTCTCTTCTTGCAAGTCACTCTCTTCTCACTTGCTCAACACGCGCAAATCAAGATGGTAAGCTCCAAAGACTCTTTCAACTTTCACCTTCTGGAAAGTACTTCCTCAACGCTGAAGCCACTGCTTCTTTGGCCTTCTTCTCAAAGTTTATGAGCCATCCAAAGCTCGTTCAGGCATTGTTTAATTTCAAGGAGGTACTTCTTGACTGTGATAATGGTTTATACATGAAAGTTCATGGAATGCCTATTTATGAAGGCATACAATCTGATCCACCATGGAATCATATCTTTAATCAAGCAATGGCCAATATATGCACAGCAGAGATGACAAAGATACTTCAAATGTACACTGGATTTGAAGGAATATCACTGCTTATCGATGTTGGAGGTGGAGTAGGGCAAAGTTTGAATATGATAATCTCCAAATATCCTTCCATCAAGGGTGTCAATTTTGATCTTCCACAAGTAATACAACAAGCTCCACCTTATCCAGGAATTGAACATGTTGAAGGAGACATGTTTGAAAGTGTTCCAAAGGGTGATGCCATACTATTGAAGGGCATATTGCACAATTGGTCGGATGAAAATTGTTTGAGAGTTCTGAATAATTGCCACAAAGCTTTGCCAGAAAATGGTAAGGTGGTTGTTGTGGATTTCATAATGCCCGAAGAAATTGGTTGTACTGAAGCAGATAAGATGGTTACTAGCTTTGATAACCTCATGTTTCTTGATGGAGGAAGTGAAAGAACAGAGAAAGAGTTCATGAATTTATGCCAATCTTCTCAATTTTCTTCTTTCAAAGTTGTTTCTCGTGCCTTCACTGTTCTAGGAGTAATGGAATTTTATAAATAA 915 0.3891 SEIASQLPFQHKKLPQRLDRMLSLLASHSLLTCSTRANQDGKLQRLFQLSPSGKYFLNAEATASLAFFSKFMSHPKLVQALFNFKEVLLDCDNGLYMKVHGMPIYEGIQSDPPWNHIFNQAMANICTAEMTKILQMYTGFEGISLLIDVGGGVGQSLNMIISKYPSIKGVNFDLPQVIQQAPPYPGIEHVEGDMFESVPKGDAILLKGILHNWSDENCLRVLNNCHKALPENGKVVVVDFIMPEEIGCTEADKMVTSFDNLMFLDGGSERTEKEFMNLCQSSQFSSFKVVSRAFTVLGVMEFYK* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0337 304 SUPERFAMILY "Winged helix" DNA-binding domain 1 58 IPR036390 -
Pvu5g0337 304 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 65 302 IPR029063 -
Pvu5g0337 304 CDD AdoMet_MTases 146 242 - -
Pvu5g0337 304 PANTHER O-METHYLTRANSFERASE 1 304 IPR016461 GO:0008168
Pvu5g0337 304 PIRSF O-mtase 1 304 IPR016461 GO:0008168
Pvu5g0337 304 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 304 - -
Pvu5g0337 304 Pfam O-methyltransferase domain 90 284 IPR001077 GO:0008171
Pvu5g0337 304 Gene3D Vaccinia Virus protein VP39 115 292 IPR029063 -
Pvu5g0337 304 Gene3D - 1 133 IPR036388 -
Pvu5g0337 304 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 304 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0337 Pvu-Chr5 2973815 2975036 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0337 1 296 Monolignol Biosynthesis Gene Families AT5G54160 46.488 5.34e-93 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0337 - - pvu:PHAVU_005G0323000 608.601