Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0325 ATGGCAGCAGAGTTGATAGGTGGGGCATTTCTCTCAGCAGCCCTTCAAGTGACTTTTGATAGGTTGGCTTCAAGGGATGTCAAAGACTACTTCCATGGAAGGAAACTCAAGGATAAGATGCTCATAAAGCTAGGTATTGTGCTGAATTCCATTAACCAAGTGCTGGAGGATGCAGAGGAAAGGCAGTACAAAACCCCAAATGTGATGAAGTGGCTTGATCAGCTTAAAGAGGCTATATATGAAGCAGAATTGCTGTTAGATGAGGTTGCCAACGAGGCATCGCGACAGAAGCTGGAAGCTGAATTTGATCCTGCTACTAGCAAGGTGCGAGGTTTTTTCAGGGCTTTTGTTAATCCATTTGACAGAGAAATTGCATCTAGGGTCGAAGAACTACTAGAGAACATACAATTTCTTGCAAAGCAAAAGGATATGTTAGGATTAAGAAAGATAATTTGTGCTGACAATGAAGTTGGAGTCAGCTGGAAACAATCCAACCAATTGCCAACTACATCCTTGGTGGATGAATCTAGAATTTGTGGTAGAGAGGAAGATAAAGAGGAAATCATCAAGATTTTACTTTCAGACAATGTCACATGCAATCAGGTGCCCGTAATTAGTATAGTGGGAATGGGAGGGATGGGTAAGACCACCCTCACTCAGCTTGTGTATAATGAACAAAGGGTACTAGATCAATTTGACCTTAAGGCTTGGGTCTATGTTTCACAATATTTTGATGTTGTTGCTGTCACAAAAGCAATTCTTAAGGCATTTGGGTCCAAAGCAGCAGAAGAAAAAGACTTGAATCTACTTCAGCTTGAATTGAAGGAGAGACTGATGGGAAAGAGATTTTTGCTTGTTCTAGATGATGTTTGGAATGAAAACTATGCAAGTTGGGGGGCACTACAGATCCCCTTCATTTATGAATCTTCAGGAAGTAGGATTCTTATTACCACTCGTAATGAGAAGGTAGCATTGGTCATGAACTCCTCCCAACTATATCATTTAAAGCCATTAGAGAAAGAAGATTGTTGGAGGCTATTTTCGAATCTTGCATTTCATGACAAGGATGCCACCAAATATCCAAATCTTGTATCAGTTGGCAGTAAAATTGTTAACAAGTGTGGAGGATTGCCTTTAGCTTTAAAAACATTGGGAAATATCTTGCGAGTAAAATTCTCCCAGCATGAATGGGTTAAGATATTGGAGAGTGATATGTGGCACCTATCTGACAATGATGGCAACATTAACCCCGCTCTTAGATTGAGTTACCACAATCTTCCTTCCTATTTGAAGCGTTGTTTTGCTTATTGCTCCATATTTCCAAAAGGTTATGAGTTTGACAGGGATCAGTTAATCCAACTGTGGATGGCAGAAGGTTTGTTGAATTGCTGCCAAATAAATAAGAGTGAAGAAGAGTTAGGTAGTGAGTTCTTCAATGATCTAGTAGCAAGGTCATTTTTTCAACGAGCAAGACGCCATGCTTCGCGGTTCACTATGCATGATCTTCTTAATGATTTAGCAAAATCTGTCTCAGGAGAATTTTGTTTACAGATAAGTGCCAATTTGGAGAAAAATATAACCAGGAGAACACGCCACATTTCATTGTCTCACAAAATTAACATTGATGATCAACTTTTGGAGCATATTAGTAAGTGTAACAGATTACGTTGTCTTGTGGCATTCAAATGGGATTTCGGCAGAGGAGGCTTGATCAACAGTGATAAACAACGTGTTTTGTTCTCTACATTGAAATATTTACGTGTGTTATCCTTCTATAATTGTTTTCTCACTGAGTTAGTTGATGATATAGGCAATTTAAAGCTTTTGCGTTATTTAGATCTTTCGCACACTAAGATTAAAAGATTGCCTGACTCCATTTGTAGGCTGCATAATTTGCAGACACTTTTACTATTCTGGTGCTATCATTTGGAAGAGCTTCCCGTAGATTTGCACAAACTTGTTGCCTTGCGTCATCTTGATTTGAGTATGAGCGGAATAAACAAGATGCCAAACCACATAGGAAAACTGAAACATCTTCAGACCCTGACTAGTTTTTTTATCAGGAAGCATGATGTTAAGGAATTGGGAAATCTCAGCAATCTTCAAGGAACACTTTCAATTTTCCGGTTAGAAAATGTCACTGATCCTGCGGATGCCATGGAAGCTAATTTGAAAGATAAAAGACATTTAGATGGATTAGTGTTGGATTGGGGTGACAAATTTGGAAGGTGCAATGAAAATGAGGACTCAATAATAGAAAGACAGGTGTTGGAGGCTCTTCAACCAAATGAGAACTTGAAAAGGCTTTCTGTTTTACGTTATGATGGAACTAGCTTTCCAAGTTGGTTTGGAGGATCTCATTTGCACAATTTGGGGTCCATAACACTGACTGAAAGCAAATTCTGCTTTGTCTTGCCACCATTTGGGCAGCTTCCCTCTCTGAAGGAGCTATCCATATCATGCTTTTCTGGAATAGAAGTCATTGGTCCCGAGTTCTGTGGTAATGATTCCTCAAATATTCCTTTCAGATCTCTTGAAATTTTAAAATTTGAGGAAATGACTGCATGGAAAGAATGGTGCAGTTTTGAAGGTCGTGTTGAAGAAGGCCAAGGTTTGTCTTGTCTTAAAGAGCTTTCTGTGAGGCGTTGTCCTTGGTTGAGAAGGGCCTTGCCTCAACACCTTCCTTCTCTGCAGAAGTTGGTAATTTCTGAATGCCAACACTTAGAGGATTCAGTTCCCAAGGCTGCTAGTATTCATGAGATGAAGTTGCATTTGTGTGAAAAACTTTTCCTGAAAGATTTGCCATCCAGCTTGAAGAAGGCCACAATTCAAGGAACTTGCATCATTGAGTCCTGCCTCCAGCAAATTCTTGTCAACAATGCCTTTCTTGAAGAGTTGAAAATACACGACTTTCATGGTCCAAATAAAAAATGGTCCTCTTTGGATTTGCATAGACATGATTCTCTTGGCACTCTCTCTATAACAAGCTGGTACTCTTCCTCTTTGCCTTTTGCACTACACTTGTTTGCCAATCTTCATTCTCTAAGTCTCTATGATTGTCCACATCTTGAGTCATTTCCCGAGGGGGGTTTGCCTTCAAGCCTACGCAAACTAGAAATTGAGGATTGCGCCAAGCTAGTTGCTTCTAGGGAGGAATGGGGATTGTTCAAACTCCATTCTCTCATAGAGTTAAGAGTTAGTGATGACTTGGAAAACGTGGAGTCTTTCCCAGAGGATAGGTTGCTACCACCCACTCTCAGTGTGCTCCACTTAATTGGATGTTCAAAGTTAACAACAACAAACTATATGGGTTTTCTCCATCTCAAATCTCTCAAATCCTTCTATATTGTCAGTTGCCCTCGTCTTCAATCTTTGCCAGAAGCAGCTTTATCCAACTCTCTTTCTGTTCTCCTTATTCAGGATTGCCCTTTACTTAAGCAGCGTTACCAAAAGGATGGAGAGTATTGGCATAAAATTCACCACATCCCTTCTGTTATGATTTATTAG 3507 0.3986 MAAELIGGAFLSAALQVTFDRLASRDVKDYFHGRKLKDKMLIKLGIVLNSINQVLEDAEERQYKTPNVMKWLDQLKEAIYEAELLLDEVANEASRQKLEAEFDPATSKVRGFFRAFVNPFDREIASRVEELLENIQFLAKQKDMLGLRKIICADNEVGVSWKQSNQLPTTSLVDESRICGREEDKEEIIKILLSDNVTCNQVPVISIVGMGGMGKTTLTQLVYNEQRVLDQFDLKAWVYVSQYFDVVAVTKAILKAFGSKAAEEKDLNLLQLELKERLMGKRFLLVLDDVWNENYASWGALQIPFIYESSGSRILITTRNEKVALVMNSSQLYHLKPLEKEDCWRLFSNLAFHDKDATKYPNLVSVGSKIVNKCGGLPLALKTLGNILRVKFSQHEWVKILESDMWHLSDNDGNINPALRLSYHNLPSYLKRCFAYCSIFPKGYEFDRDQLIQLWMAEGLLNCCQINKSEEELGSEFFNDLVARSFFQRARRHASRFTMHDLLNDLAKSVSGEFCLQISANLEKNITRRTRHISLSHKINIDDQLLEHISKCNRLRCLVAFKWDFGRGGLINSDKQRVLFSTLKYLRVLSFYNCFLTELVDDIGNLKLLRYLDLSHTKIKRLPDSICRLHNLQTLLLFWCYHLEELPVDLHKLVALRHLDLSMSGINKMPNHIGKLKHLQTLTSFFIRKHDVKELGNLSNLQGTLSIFRLENVTDPADAMEANLKDKRHLDGLVLDWGDKFGRCNENEDSIIERQVLEALQPNENLKRLSVLRYDGTSFPSWFGGSHLHNLGSITLTESKFCFVLPPFGQLPSLKELSISCFSGIEVIGPEFCGNDSSNIPFRSLEILKFEEMTAWKEWCSFEGRVEEGQGLSCLKELSVRRCPWLRRALPQHLPSLQKLVISECQHLEDSVPKAASIHEMKLHLCEKLFLKDLPSSLKKATIQGTCIIESCLQQILVNNAFLEELKIHDFHGPNKKWSSLDLHRHDSLGTLSITSWYSSSLPFALHLFANLHSLSLYDCPHLESFPEGGLPSSLRKLEIEDCAKLVASREEWGLFKLHSLIELRVSDDLENVESFPEDRLLPPTLSVLHLIGCSKLTTTNYMGFLHLKSLKSFYIVSCPRLQSLPEAALSNSLSVLLIQDCPLLKQRYQKDGEYWHKIHHIPSVMIY* 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0325 1168 Gene3D - 429 509 IPR036388 -
Pvu5g0325 1168 Coils Coil 72 92 - -
Pvu5g0325 1168 PRINTS Disease resistance protein signature 204 219 - -
Pvu5g0325 1168 PRINTS Disease resistance protein signature 277 291 - -
Pvu5g0325 1168 PRINTS Disease resistance protein signature 374 388 - -
Pvu5g0325 1168 PRINTS Disease resistance protein signature 892 908 - -
Pvu5g0325 1168 PANTHER DISEASE RESISTANCE PROTEIN RP 18 913 IPR044974 GO:0006952
Pvu5g0325 1168 PANTHER OS05G0414200 PROTEIN 18 913 - -
Pvu5g0325 1168 Gene3D Ribonuclease Inhibitor 568 945 IPR032675 -
Pvu5g0325 1168 Pfam Rx N-terminal domain 10 102 IPR041118 -
Pvu5g0325 1168 SMART LRR_typ_2 653 676 IPR003591 -
Pvu5g0325 1168 SMART LRR_typ_2 606 629 IPR003591 -
Pvu5g0325 1168 SUPERFAMILY L domain-like 498 913 - -
Pvu5g0325 1168 Gene3D - 337 427 IPR042197 -
Pvu5g0325 1168 Pfam NB-ARC domain 181 403 IPR002182 GO:0043531
Pvu5g0325 1168 SUPERFAMILY L domain-like 943 1160 - -
Pvu5g0325 1168 Gene3D - 161 333 IPR027417 -
Pvu5g0325 1168 Gene3D Ribonuclease Inhibitor 974 1152 IPR032675 -
Pvu5g0325 1168 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 437 IPR027417 -
Pvu5g0325 1168 Gene3D - 14 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0325 Pvu-Chr5 2903284 2907453 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0325 205 510 WRKY Transcription Factor Family AT5G45050 25.460 3.64e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0325 - - gmx:100777510 1954.1