Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0322 ATGAAAAGCCAAAAGATTTTCGTGCTAATGATTTACACCACTTTCTTTTGTTTCATGCCCACTTCCTCTCATCAAGATACTGTTACTATTACCCCAAATCACTCCATACAGTATCATGACACCCTTGTTTCTTCAGCAGGAACCTTTGAAGCAGGATTTTTCGACTTTGGAAACTCAAGAAGACAATATTTTGGAATATGGTACAAGAGCATATCACCTAGGACTATTGTGTGGGTTGCCAACAGGAATGAGCCAGTACAAAACTCAACACCAGTTCTCAAACTTACTCAACAAGGAGATCTTCTCATTCTTGATGGCTCCAGAGGCATAGTGTGGTCCTCCTCCAACTCATCAAAAACTGCAGTGAAACCAGTTATGCAGCTTTTAGATTCAGGAAACCTTGTTGTGAGAGATGGAGAGAGCTCAGAGAATCTCTTGTGGCAAAGCTTTGATTATCCTGGAGACACTTTCCTTGCAGGAATGAAACTGAAAAGTGATTTTGTAACTGGTCCATGTCAGTATCTCACGTCTTGGAGGGACTATGAAGATCCAGCTGAAGGTGAGTTTTCTTATAAGATCGATACAAGGGGCTTTCCTCAACAAGTTACTACAACCGGAACCAATATTTTCTACAGCACAGGGCCTTGGAATGGCTATCATTTCAGTGGAGTTTGTTGGGACAGAATGCACAGATTCTTGAATTTCTCTTTGGAGTTCACTGACAAAGGGGTTTCTTATGAATATGAAACGTTGAACAGTTCATTGCTTACTATAACAATGCTCAAGCTCAATCCAACAGGGGTTACAGAGCGTTCTCTGTGGTCAAACAAAAAACAAAGTTGGGATATTGTAAGCACTCATCCAATAGACCAGTGTGAATATTTTGCAGCTTGTGGTGTCAACACTATCTGCAACAGTAATGATCTTCCAATATGTGAATGTTTGCAAGGTTTCACATCAAAGTTTCAGGCAAAGTGGGATCCCCATGATTGGTCTAGTGGTTGTGTGAGAAGAACAAAATTAAGTTGTGATTATGGAGATTGGTTTAAGAAGTACACAGGAATAAAGTTGCCAGAAACGTCTTCTTCCTGGTTTGACAGGAGCTTGAGCCTTGAGGAATGTGAGACATTGTGTTTGAGAAACTGCTCTTGTACTGCATATACAAATTCAGATATTAGAGATGGTGGGAGTGGTTGCTTGCTTTGGTTCCATGACATTGTGGACATGAGAACTCACACTGCTCGAGGACAAGAAATTCATATACGACTGCCATTTTCTGAACGTGATCAAAGAAGTAATAAGAGGGACCTAAATCCAAAGAGGCTTGCAGGGATTCTAGTAGGACTTGTTGCATTCATAATTGGACTAACAATTCTTTTGTGGGCGACTTCAAAGCGTATAAAAGCGATGAAGCTACCCAAGCCAGTGAAAAAAGCTATTTCGTGGAAGCACATGATGGAGAAGGAAGAGGACAGCTTACCAACAATATTCGATTTTTCAACCATTGATGTTGCCACAAATCATTTTTCTAACAGAACCAAGTTAGGAGAAGGTGGCTTTGGAACAGTACACAAGGGCACATTGGTAGATGGACAAGAGATTGCAGTTAAGAGACTTTCAAAAACTTCTAGACAAGGAACTGAGGAGTTCAAAAATGAAGTGAAGTTGTTGGCAACACTTCAGCACCGTAATCTTGTAAAACTTCTTGGTTGTTCTATTCAACAAGATGAGAAGTTGTTGATCTATGAATTCATGCCCAACAGAAGCTTGGATTACTTTATTTTTGATACAATGCAAAGCAAATTACTAGATTGGACCAAGCGCTTGGAAATCATCGAGGGAATTGCTCGAGGTCTTATGTATCTTCATCAAGATTCTAGACTCAGAATAATACACAGAGATATCAAAACAAGTAACATTCTTCTTGATAACGATATGATTCCAAAGATATCAGATTTTGGATTAGCAAGAATATTTGGAGGAGATCAAGCTGAAGAAAAAACAAACAGAGTGATGGGAACATATGGCTATATGCCTATGCAGTGCATGGTTCTTTCTCAACCAAATCTGATGTTTTCAGTTTTGGTGTAA 2091 0.3955 MKSQKIFVLMIYTTFFCFMPTSSHQDTVTITPNHSIQYHDTLVSSAGTFEAGFFDFGNSRRQYFGIWYKSISPRTIVWVANRNEPVQNSTPVLKLTQQGDLLILDGSRGIVWSSSNSSKTAVKPVMQLLDSGNLVVRDGESSENLLWQSFDYPGDTFLAGMKLKSDFVTGPCQYLTSWRDYEDPAEGEFSYKIDTRGFPQQVTTTGTNIFYSTGPWNGYHFSGVCWDRMHRFLNFSLEFTDKGVSYEYETLNSSLLTITMLKLNPTGVTERSLWSNKKQSWDIVSTHPIDQCEYFAACGVNTICNSNDLPICECLQGFTSKFQAKWDPHDWSSGCVRRTKLSCDYGDWFKKYTGIKLPETSSSWFDRSLSLEECETLCLRNCSCTAYTNSDIRDGGSGCLLWFHDIVDMRTHTARGQEIHIRLPFSERDQRSNKRDLNPKRLAGILVGLVAFIIGLTILLWATSKRIKAMKLPKPVKKAISWKHMMEKEEDSLPTIFDFSTIDVATNHFSNRTKLGEGGFGTVHKGTLVDGQEIAVKRLSKTSRQGTEEFKNEVKLLATLQHRNLVKLLGCSIQQDEKLLIYEFMPNRSLDYFIFDTMQSKLLDWTKRLEIIEGIARGLMYLHQDSRLRIIHRDIKTSNILLDNDMIPKISDFGLARIFGGDQAEEKTNRVMGTYGYMPMQCMVLSQPNLMFSVLV* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0322 696 ProSiteProfiles Protein kinase domain profile. 509 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0322 696 SMART serkin_6 509 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0322 696 SMART ntp_6 344 423 IPR003609 -
Pvu5g0322 696 Gene3D - 22 150 IPR036426 -
Pvu5g0322 696 Pfam S-locus glycoprotein domain 211 321 IPR000858 GO:0048544
Pvu5g0322 696 Pfam PAN-like domain 343 409 IPR003609 -
Pvu5g0322 696 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 184 IPR036426 -
Pvu5g0322 696 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 18 679 - -
Pvu5g0322 696 SMART blect_4 33 153 IPR001480 -
Pvu5g0322 696 Pfam D-mannose binding lectin 75 179 IPR001480 -
Pvu5g0322 696 SUPERFAMILY Protein kinase-like (PK-like) 490 679 IPR011009 -
Pvu5g0322 696 CDD B_lectin 41 153 IPR001480 -
Pvu5g0322 696 ProSitePatterns Protein kinases ATP-binding region signature. 515 537 IPR017441 GO:0005524
Pvu5g0322 696 ProSiteProfiles PAN/Apple domain profile. 343 424 IPR003609 -
Pvu5g0322 696 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 679 - -
Pvu5g0322 696 ProSiteProfiles Bulb-type lectin domain profile. 27 149 IPR001480 -
Pvu5g0322 696 Gene3D Phosphorylase Kinase; domain 1 482 584 - -
Pvu5g0322 696 Pfam Protein kinase domain 510 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0322 696 Gene3D Transferase(Phosphotransferase) domain 1 585 689 - -
Pvu5g0322 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Pvu5g0322 696 CDD PAN_AP_plant 339 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0322 Pvu-Chr5 2866049 2870135 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0322 497 678 Receptor kinase-like Gene Family AT4G05200 64.286 4.96e-77 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu5g0322 Pkinase 3.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0322 - - pvu:PHAVU_005G030900g 1431.39