Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0318 ATGGAGCAACCTTCTTCCATGGGAAAGTGGACTTATGATGTTTTCCTCAGTTTTAGAGGCGAGGATACCCGCTTTGGTTTCACTGGTCATCTCTACAATGCTTTACGTCAAAGGGGGATCAGAACATTCATGGATCATGAGGAGCTTGAGAGAGGAGAGCAAATTTCAGCTACAATTTTCAAAGCCATTGAAGAGTCTAGGATGGCCATAGTTGTGTTCTCAAAAGACTATGCATCCTCAACATGTTGCCTCGAAGAACTTCTCAAAATCCTTGATTGTAAGAAAACCAAGAAACTCAGAGTTTATCCAATATTTTACAACGTGGATCCATCAGAGATACGACACCAGAGTGGAAGTTATGGTGAACAGTTGGCTAACCATGAAAACAAAATGAGGTATACAAAAGAAAAGGTGAAAAATTGGAGGCTGGCTCTGCATGAAGCTGCAAATCTTGTAGGGTGGCATCATAAAGAAGGATATGGATATGAGTATGAACTTATCACAGAGATTGTTGACAAGGTGGGCATATCAAAAGGAAAGCTTTTAACTGTTGATAAGATGCTTGTTGGAGTGGAGTTTCGTATACCCCAAATAGAATTCCGTTTGCAAATCTCTGATCCTGCTGTTCGCATGATGGGAATATGTGGAGTTGGTGGAATAGGCAAAACCACTCTAGCTCAAGTTTTGTATAACTACATCAGCCAACAATTTGAAGGTTCATGTTTTCTCAATGATGTGAGAGGAAATTCAGCAAAATATGGGTTAGCATATCTGCAAGAGGCAATTATTTCTGATATAGCTGGTGACAGCACCAAGGTGGTTAATGAGAACCAAGGAATTCCAATCCTTATTAGGAAGTTGCAAGGCAAAAGGGTTCTTCTGATACTTGATAATGTGGACAAGGTGGAGCAATTGGAGAATTTGGCAGGAGAATGCAATTGGTTTGGTTTGGGAAGTAGAATTGTCATAACTAGCAGGTGTAAAGATGTTCTAGCTGCTCATGGAGTTGAGAATGTATATGATGTACCAAAATTAGATAATTATGAAGCAATTCAACTTCTATGTTCCAAGGTAACCGTGGGACCTGTACCTGATTATTACTATGGGGTTTGGAAACATGCAGTTGACTGTTCCAAGGGCCTTCCATTGGCTTTGAAGTATATAGGTTCTCATTTGCTAGAAAAAATGAAGGCTGTTGATTGTAATTTGTCAGAAACATCAATTGAGGAATTGAAGATTGCGGTAGAAAGATATGTAGATGGAGGAGAAATTCAAAGTATACATAAAGTGAGTTATGATAGTTTGAATGAATGTGAGAAGAGAATTTTCCTTGACATTGCATGTTTCTTCAGTGGAGAGCCCTTATCATATGTTGAGGAAATACTGTCAGCTTGTGGTTTCGATCCAAAATATAGTATTACCAGACTAACTGATAGATCTCTCCTATCTATCACTCCCGGTGGAAGCTTGATGATGCATGACAATATCAAAGACATGGCCATGAAAATAGTGCAACAGGAATCACCCCTGCATCCAGGAGAACGAAGTAGATTATGGTGCCCTCAAGATGTTCTTCAAGTTTTAAATGAAAATCAGGGAACGGATCAAATTGAAGTTATGATGTTGGTTGACTTGCCACAAGGAAATGAGGTACTGAAGTTGAGTGATAAAGCCTTCAAAGATATGAAAAACCTGAGAATATTAATTATTAAGGATGCCGTATATTCTGGAGTCCCCCAATATCTCTCAAATAGCTTGAGAGTCTTGTTATGGAGTGGATATCCTTCAGACTGTTTACCACTTGATTTTCTCAACTTGCCTTCTGATTGTCTCATTTTGAACAATTTCAAGAATATGGAGTGTCTGACTAAATTGGATTTCACTGACTGTGAATTTTTGACACAAGTACCTGACATTTCAGGAATCTCTGACTTGAGGATATTGCATCTAGATAATTGCATAAACTTGATCAAGATTCATGATTCTGTTGGATTTCTTGGTAATCTTGAAGTGCTAACTGCAACTAGATGCACTGGTCTAGAAATAATTCCATTAACATTCAAGTTGGCCTCTCTAAGAGATCTCTCTTTCTCTGAGTGCTCGAGACTTGTAAGGTTTCCAGAAATATTGTGTGAGATAGAAAATTTGCATTATCTCAACATGTTGCAAACTGCAATAGAGGAACTACCATTTTCTATTGGAAATCTTAGAGGACTTGAATCTTTAAATCTAATGGAATGTGCTAGGCTTGATAAGCTACCCAGTAGCATTTTTACACTTCCAAGACTTACAGAAATTCAAGCTGACTCATGTAGAAGGTTTGATATTTCTGTTGAGTGTGAAAATCATGCACAACAGAAATTAACAGCATCTTCAAACTATGTTTATCTGTATCTGAGCTCTTGCAACTTAACAACTGAACACCTTGTTGCATGTCTCAGTGGTTTTGCAAGTGTGGTATATTTGGACATATCTTACAATAATTTTACAGTTCTTCCAGCATGCATTAAGGAATGTGTTCATTTGAAGACTATTCTACTAAGCAATTGCAAGCAGCTTCAAGACATTTTAGTGATACCTCCTAAGTTAGAACATATAGATGCATTGAACTGCACATCATTGACATCCCAGTCATCAAGTGTACTATTGAACCAGGCATTCCATGCAACTGGGGAAAAAACTGTAATTCTTCCAGGTTCAAGGATTCCAGAATGGTTTGATTACTTTAGCAGTGAAAGATCCATAACCTTTTGGGGGCGTGGGAGATTCCCAAGCATTTGTGTGTGTGTTTCTTTTGGAATGTTGGAAACTCCACTGCAGCATTTTGGAGTTGGATTAAGGATAATGATCAACGGCTACAAAAGCATACTGTCTCAAAGTTGCTACAATTGGCCAATTGAGACAGATCATGTGTGGCTATTTGATCTAACTGCAGTTGTTAATCATAAAGATCTGGTTGGAACATTTGTGAAGAGTGATTGGAATAGTGTGGAGATTGAAATGGAAAGGAATGGTTGTGTAATGGATGAGCATGGGCCAACAAGAACAATGGGTATTGTGAAATGCTATGGAATTCACGTATATAGGCAAGAAAGTAAAATGGAGGACATTTCATTCACAAAACCTATAAAGCTACAAGAAAATAGTACAAGGAAAAGGAAGTTTTGGATTCCATGA 3177 0.3812 MEQPSSMGKWTYDVFLSFRGEDTRFGFTGHLYNALRQRGIRTFMDHEELERGEQISATIFKAIEESRMAIVVFSKDYASSTCCLEELLKILDCKKTKKLRVYPIFYNVDPSEIRHQSGSYGEQLANHENKMRYTKEKVKNWRLALHEAANLVGWHHKEGYGYEYELITEIVDKVGISKGKLLTVDKMLVGVEFRIPQIEFRLQISDPAVRMMGICGVGGIGKTTLAQVLYNYISQQFEGSCFLNDVRGNSAKYGLAYLQEAIISDIAGDSTKVVNENQGIPILIRKLQGKRVLLILDNVDKVEQLENLAGECNWFGLGSRIVITSRCKDVLAAHGVENVYDVPKLDNYEAIQLLCSKVTVGPVPDYYYGVWKHAVDCSKGLPLALKYIGSHLLEKMKAVDCNLSETSIEELKIAVERYVDGGEIQSIHKVSYDSLNECEKRIFLDIACFFSGEPLSYVEEILSACGFDPKYSITRLTDRSLLSITPGGSLMMHDNIKDMAMKIVQQESPLHPGERSRLWCPQDVLQVLNENQGTDQIEVMMLVDLPQGNEVLKLSDKAFKDMKNLRILIIKDAVYSGVPQYLSNSLRVLLWSGYPSDCLPLDFLNLPSDCLILNNFKNMECLTKLDFTDCEFLTQVPDISGISDLRILHLDNCINLIKIHDSVGFLGNLEVLTATRCTGLEIIPLTFKLASLRDLSFSECSRLVRFPEILCEIENLHYLNMLQTAIEELPFSIGNLRGLESLNLMECARLDKLPSSIFTLPRLTEIQADSCRRFDISVECENHAQQKLTASSNYVYLYLSSCNLTTEHLVACLSGFASVVYLDISYNNFTVLPACIKECVHLKTILLSNCKQLQDILVIPPKLEHIDALNCTSLTSQSSSVLLNQAFHATGEKTVILPGSRIPEWFDYFSSERSITFWGRGRFPSICVCVSFGMLETPLQHFGVGLRIMINGYKSILSQSCYNWPIETDHVWLFDLTAVVNHKDLVGTFVKSDWNSVEIEMERNGCVMDEHGPTRTMGIVKCYGIHVYRQESKMEDISFTKPIKLQENSTRKRKFWIP* 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0318 1058 Gene3D - 6 179 IPR035897 -
Pvu5g0318 1058 SMART till_3 11 151 IPR000157 GO:0007165
Pvu5g0318 1058 Pfam TIR domain 12 178 IPR000157 GO:0007165
Pvu5g0318 1058 Gene3D - 344 436 IPR042197 -
Pvu5g0318 1058 SUPERFAMILY L domain-like 493 879 - -
Pvu5g0318 1058 ProSiteProfiles TIR domain profile. 10 178 IPR000157 GO:0007165
Pvu5g0318 1058 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 8 1052 - -
Pvu5g0318 1058 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 154 IPR035897 -
Pvu5g0318 1058 Gene3D Ribonuclease Inhibitor 701 887 IPR032675 -
Pvu5g0318 1058 Gene3D - 180 338 IPR027417 -
Pvu5g0318 1058 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 446 IPR027417 -
Pvu5g0318 1058 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 1052 IPR044974 GO:0006952
Pvu5g0318 1058 Gene3D Ribonuclease Inhibitor 541 700 IPR032675 -
Pvu5g0318 1058 Pfam NB-ARC domain 203 413 IPR002182 GO:0043531
Pvu5g0318 1058 PRINTS Disease resistance protein signature 211 226 - -
Pvu5g0318 1058 PRINTS Disease resistance protein signature 286 300 - -
Pvu5g0318 1058 PRINTS Disease resistance protein signature 378 392 - -
Pvu5g0318 1058 PRINTS Disease resistance protein signature 734 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0318 Pvu-Chr5 2828784 2833023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0318 12 771 WRKY Transcription Factor Family AT4G12020 31.566 2.51e-78 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0318 - - gmx:100796191 1647.87