Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0308 ATGCCGGATGTTCAAGCCCTTAATGAATTCGTGAATCTGCTTAAGAAGCGTAAAATTGAAGGGTCTCAGGCCACGGCGAAGCTGACAGCAGAGTTGCTCCGGTCAGTGATTTCGCATCAGCGGGTGCCACACACAAACCAGGCCACATATCTGATTAATGCAGTAAGGGCTGTGGGGGAGCAGATTATTGATGCTAATCCTATTGAGTTATCTGTTGGAAATATTGTGAGGCGTGTTCTTCACATTATCAGGGAGGAGGATCTTTCCCTTGTTACAGATGCTATGGCTGGTTTTGGGATGTCCGCTACAAGTGATGATGAAGATGATGTGGAGCGAGATGATCATCCTGCGTTATCTGCTGTTGTTGTTGCAGCTGCTGCAAGAAGCACCTTGCGTCCACCGTCATTACAAACTCTTCTAGAGGATGTGACGGATTCAGCAGCCATTCCACCAACGCCTTCCTCGACGGGTGACTCTGATGGGAAAAGTAGATCCGTTGAAAAGGGTACAAGAGGTCGGAAGTTGAAGCATGATGTCATTGAAGCAGTCAATGAACTTATTCAAGACATAACCTCTTGCCATGAACAAATAGCAGAACAAGCAGTAGAGCATATTCATCAAAATGAGGTAATATTAACGCTAGGCAGTTCTAAAACAGTGTTCGAATTTCTTTGTGCTGCAAAGGAGAAAAAGAGATCATTTAAGGTGGTTGTTGCTGAAGGTGCCCCAAGGTATCGGGGACATCTCCTTGCGAAAGAATTGGCTGCCAGAGGCTTACAGAGCACAGTAATTGCTGATTCTGCGTGTTTTGCTATGATTTCCAGAGTGAATATGGTTATAGTTGGTGCGCATGCCGTCATGGCTAATGGTGGAGTAATTGCCCCAATTGGGTTGCATATGGTTGCACTTGCTGCTCATAGGCATGCTGTTCCTTTTGTTGTACTTGCTGGGAGTCATAAGTTGTGCCCTTTGTATCCTCACAATCCTCATGTCCTACTGAATGAGTTGAGATCCCCATCCGAGCTACTAGACTTTGGAGAATTCTCAGATTTAATGGATTCTGCAACTAGTCTTGGTTCTCTTCATGTTGTTAATCCAGCATTTGATTATGTGCCACCTAACCTTGTTAGTCTCTTCATCACTGACACTGGAGGGCATAACCCATCATATATGTACCGGCTCATAGCTGATTATTACTCTGCTGATGATTTGGTGGTGAAACAGAGACCTACTGCAGGGAATTGA 1245 0.4498 MPDVQALNEFVNLLKKRKIEGSQATAKLTAELLRSVISHQRVPHTNQATYLINAVRAVGEQIIDANPIELSVGNIVRRVLHIIREEDLSLVTDAMAGFGMSATSDDEDDVERDDHPALSAVVVAAAARSTLRPPSLQTLLEDVTDSAAIPPTPSSTGDSDGKSRSVEKGTRGRKLKHDVIEAVNELIQDITSCHEQIAEQAVEHIHQNEVILTLGSSKTVFEFLCAAKEKKRSFKVVVAEGAPRYRGHLLAKELAARGLQSTVIADSACFAMISRVNMVIVGAHAVMANGGVIAPIGLHMVALAAHRHAVPFVVLAGSHKLCPLYPHNPHVLLNELRSPSELLDFGEFSDLMDSATSLGSLHVVNPAFDYVPPNLVSLFITDTGGHNPSYMYRLIADYYSADDLVVKQRPTAGN* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0308 414 MobiDBLite consensus disorder prediction 142 174 - -
Pvu5g0308 414 PANTHER BNAA01G32370D PROTEIN 7 53 - -
Pvu5g0308 414 PANTHER BNAA01G32370D PROTEIN 54 406 - -
Pvu5g0308 414 SUPERFAMILY NagB/RpiA/CoA transferase-like 6 403 IPR037171 -
Pvu5g0308 414 Pfam Initiation factor 2 subunit family 18 388 IPR000649 GO:0044237
Pvu5g0308 414 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 54 406 - -
Pvu5g0308 414 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 7 53 - -
Pvu5g0308 414 Gene3D - 193 398 IPR042529 -
Pvu5g0308 414 MobiDBLite consensus disorder prediction 142 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0308 Pvu-Chr5 2732853 2739457 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0308 1 406 Eukaryotic Initiation Factors Gene Family AT3G07300 77.506 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0308 K03754 - gmx:100807877 714.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0308 5 2732853 2739457 Pvu5g0308 5 2732853 2739457 ECH