Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0302 ATGGATCAACAATCCAAATCCAAAGAGGTATGTTTTTGCTCTGAAGAATATTTGATTCATAAGAATCAACATAATCCTTCTTATTCGCTACCTTCTGAAAACTTCAGAAAATATATCGTAGAGCATGGTGAACCTCTTACGAAGAGACTCACAAATAGTGATATCAATGTTAATTTAAATAGATTTCTTCTGAATAAGAATCAAGCAGAAGAATATTTTTTACCGTTATTGGAGGATCATGAAAATATCGACAAAGGAGTAGATGTTTGTGGCTACGATGATTATGAAAATGTTTATTTTCTCACATTTAAGAAGTGGGCAAATAAATATTATGTATTGAATGGTGATTGGAAATTTTTCTTTCAAAATCATCAACTGCAGAGCAACGATACAATCACAAGTTGGATGTTTCGTCATTCAAATCATACGAAGTTATGTATAGCTCTTGAATATGAGAAGATTGGAAGATAA 471 0.3121 MDQQSKSKEVCFCSEEYLIHKNQHNPSYSLPSENFRKYIVEHGEPLTKRLTNSDINVNLNRFLLNKNQAEEYFLPLLEDHENIDKGVDVCGYDDYENVYFLTFKKWANKYYVLNGDWKFFFQNHQLQSNDTITSWMFRHSNHTKLCIALEYEKIGR* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0302 156 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 21 153 IPR005508 GO:0003677
Pvu5g0302 156 SUPERFAMILY DNA-binding pseudobarrel domain 47 143 IPR015300 -
Pvu5g0302 156 PANTHER B3 DOMAIN PLANT PROTEIN 21 153 - -
Pvu5g0302 156 CDD B3_DNA 46 147 IPR003340 GO:0003677
Pvu5g0302 156 Gene3D - 44 152 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0302 Pvu-Chr5 2663301 2663771 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0302 45 153 B3 DNA Binding Superfamily AT4G03170 40.541 8.01e-21 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0302 - - pvu:PHAVU_005G028900g 336.265