Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0282 ATGGGTATGGCTGCAGAGGCACAGTTTCATGTTTTGGCTGTTGATGACAGTGTTATTGACAGAATGTTGATTGAGAGGCTCCTCAAAACCTCTTCTTTTCATGTCACTGCCGTGGATTCTGGGAGTAAGGCTTTGAGGTTTCTTGGTTTGGTTGAAGATGAGAAGAGAACTGAAGAGCCTCCCACTATTTCTCTAGAAGCCAATCAGGATGTGGAAGTAAACCTGATCATAACTGATTACTGTATGCCAGAAATGACAGGGTATGATCTGCTCAGAAAAATCAAGGAATCTAAATCTCTTAAAGACATACCAGTGGTGATTATGTCCTCAGAGAATGTTCCATCAAGGATAAACAGATGCCTAGAAGATGGAGCTGATGAGTTCTTTTTGAAACCAGTTCAACAGTCAGATGTAAACAGGCTCAGACCCCATTTGTTGAAATCAAAAGTTAAGGATGAAGAAGAGCAACAAATCAGTAATAAAAGGAAGGAAACAGAAGAAAGGCATTCCCCAGAGAAAACCAGGACAAAAATGGAGCCTCAAAAAGTGGTTAATTCCAGTTAA 564 0.4043 MGMAAEAQFHVLAVDDSVIDRMLIERLLKTSSFHVTAVDSGSKALRFLGLVEDEKRTEEPPTISLEANQDVEVNLIITDYCMPEMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEDGADEFFLKPVQQSDVNRLRPHLLKSKVKDEEEQQISNKRKETEERHSPEKTRTKMEPQKVVNSS* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0282 187 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Pvu5g0282 187 Gene3D - 10 185 - -
Pvu5g0282 187 MobiDBLite consensus disorder prediction 141 187 - -
Pvu5g0282 187 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 2 183 - -
Pvu5g0282 187 MobiDBLite consensus disorder prediction 142 179 - -
Pvu5g0282 187 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
Pvu5g0282 187 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 183 IPR045279 GO:0009736
Pvu5g0282 187 SMART REC_2 9 145 IPR001789 GO:0000160
Pvu5g0282 187 CDD REC_typeA_ARR 11 141 - -
Pvu5g0282 187 SUPERFAMILY CheY-like 9 150 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0282 Pvu-Chr5 2488729 2490502 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0282 1 163 Response Regulator Gene Family AT3G57040 63.636 7.51e-72 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu5g0282 Response_reg 2.8e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0282 K14492 - gmx:100818762 294.278