Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0269 ATGGACACCAAGTTGTTGACAATCCGTACTCTGGTCAGCTCCCTCACTTCCTCCTCCGACCAAACCCGTCTCGCCGCCCTCCGCCACCTCCGCCGCACCTCCAACGAGGACCCCGCCGCCCGCCCTCTCATCTCCGCCGCCGGCGCCGTCCCCCTCCTCGCCGGCGCCCTCTACTCCCCCTCCCACCCCATCCAAGACCACGCCGCCGCCACTCTCCTCAACCTCTCCATCTCCGACCGCCGCCCCCTGCTCTCCTCCCCCACCCTCCTACCCGCCCTCGCCCACCTCCTATCCCGCCACGCCACATCCTCCGCCGCCTCCGCCGTCCAATCCGCCGCCGCCACCCTCCACAGCCTCCTCGCCGTGGTAGCCGAGTTCCGCCCCGCCGTCGGTGCAAAACCCGAAATTCTTCATGCCCTCATCGGCATAATCAGTGATCCTGATTCGGTGACGAGGACGATAAAGGACGCTCTGAAAGCATTGTTTGGAATCGCACTCTACCCGCCGAGCCGAACTACTCTGGTCCGGCTAGGCGCAGTGCCCGTGCTCTTCGATCTGGTCGCGAAGGACAAGAACGGGACGAGGAAAGTTGGCATAATTGAGGATGCTACTGCGGTGATCGCGCAGATTGCGGCGTGCGAGGAGAGCGAGGACGCGTGTCTTAAGGTTTCGGGGGTTTCTAGGTTGGCCATGATGTTGTGTTCGGAAAATGGAAGCTGCAGTTTGAGGACAAAGGAGAATGCTGTTGCGGCGTTGTTGAATTTGGTGAGATATGGGAGTGAGAGAGTCGTTGGGGAGGTTAGGAACAAGGTTGGGACGTTGGATGGGATCTCCTACGTGCAGGAACACGGTAGCCCCAAAGGGAAGAGCAAAGCCGTGGCCTTTTTCAAGCTTCTGCTTGATGGTGGAAGCAGTGGTGAAATTGTTCAGGATTTGTACCCTGTTGACCCTGATTCGGGTTCAAGTTGCAGGGAATAA 978 0.6002 MDTKLLTIRTLVSSLTSSSDQTRLAALRHLRRTSNEDPAARPLISAAGAVPLLAGALYSPSHPIQDHAAATLLNLSISDRRPLLSSPTLLPALAHLLSRHATSSAASAVQSAAATLHSLLAVVAEFRPAVGAKPEILHALIGIISDPDSVTRTIKDALKALFGIALYPPSRTTLVRLGAVPVLFDLVAKDKNGTRKVGIIEDATAVIAQIAACEESEDACLKVSGVSRLAMMLCSENGSCSLRTKENAVAALLNLVRYGSERVVGEVRNKVGTLDGISYVQEHGSPKGKSKAVAFFKLLLDGGSSGEIVQDLYPVDPDSGSSCRE* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0269 325 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 304 - -
Pvu5g0269 325 SMART arm_5 37 77 IPR000225 GO:0005515
Pvu5g0269 325 SMART arm_5 213 257 IPR000225 GO:0005515
Pvu5g0269 325 SMART arm_5 167 212 IPR000225 GO:0005515
Pvu5g0269 325 Gene3D - 6 297 IPR011989 -
Pvu5g0269 325 PANTHER U BOX DOMAIN-CONTAINING 2 304 - -
Pvu5g0269 325 SUPERFAMILY ARM repeat 7 300 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0269 Pvu-Chr5 2340207 2341184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0269 8 297 U-box Gene Family AT2G28830 27.986 1.85e-21 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0269 - - vun:114176946 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0269 5 2340207 2341184 Pvu5g0269 5 2340207 2341184 ECH