Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0257 ATGGCATTCATCGATAAGCAAAAGGGAGAAGAAGAAAAGGAACCGTACAGAATGGAAGAAGAAGAAGAAGAAGATAGCGAAGAAGCAGAAGAAGAAGCATGGGACGATTGGGAAGGAGAGCGAGAATCGGAATTTGTGTGTCTCTTCTGTGACTCTCAGTACAGTTTGTGCGGTTCCTTGTTCGATCATTGCGCATCCCTTCACCATTTCGATTTCCACGCGATTAGAGCAGCGCTCAAACTAGATTTCTATGCCTCCTTCAAGCTCATCAACTTCGTTCGCTCTCAGGTGGCAGAGAACAAATGTTGGAGTTGTGGATTAACATGTCAGTGCAAGCGTGACTTGCAGAATCATCTGCATGATATAGTTGACTTTAATGAGATGAAGACTCTATGGAATGATGATAGATATCTAATACCTTTCATGCAAGATGATTCTCTGCTGTACAGTTTTGGTGAATGTGACGAAGAAGGTGAAGATGAGCAAATTACATCAATTGATGAAGATCTCATAAAAGATTTGATGAACATTGACGAGAGAAGCTCTGTTGATCATGATTCTGTGGAAAATTCAAAAGGGGATCTTATTAATGGTAAAGACTCAATGGGACATGCCTTGTGCAGTGATAAGGATCCAAAAAAGGGTCCTTTAGTGGCTAATTCTCCGAATCACATTGCAAAACATATTAAGAAGGTTAATGAAGGTTATTTTGGGTCATACAGTTCATTTGGTATCCATCGAGAAATGTTAAGTGATAAGGTGAGAATGGATGCTTATGGTCAAGCAATATTGAAGAATCCCTCCCTACTAAAGGGTGCTGTTGTTATGGATGTAGGTTGTGGAACTGGAATCCTCAGCCTGTTTTCGGCAAAAGCTGGAGCTTCAAGGGTTATTGCTGTTGAGGCTAGTGCCAAGATGGCAGCAGTGGCATCTCAGGTTGCAAAAGATAATGGTCTTTGGTGGAATAAAAGCCAAAGTGGAATCGATGGTCTCCAAAAGGGAGTTATGGAAGTGGTTCATGGTATGGTTGAAGAGATTGATAAAACAGTTGAACTTCAACCTCACAGTGTTGACGTGTTGCTAAGTGAATGGATGGGATATTGCTTGCTGTATGAATCCATGCTTGGTTCAGTGCTTTATGCACGGGACCGGTGGTTGAAGCCTGGTGGTGCCATTCTTCCTGACACAGCAACTATTTTTGTTGCAGGATTTGGAAAAGGAGCCACAAGTCTTCCGTTTTGGGATAATGTCTGTGGTTTTGATATGTCTTGCATTGGGAAGGAGCTTGTCATAGATGCTGCCCAAATTCCTATAGTTGATGTTCTGGACTCACAAGATTTAGTTACCAGTTCTGCGATTCTGCAGTCTTTTGACTTGGCAACCATGAAGCCCGATGAAGTGGATTTCACTACGACTACTACTTTGGAATTAAAACCAAGTGCTTCAGCAACATGGTGCTGGTGCTATGGTGTTGTCCTATGGTTTGAAACTGGTTTTACGAGGAGATTCTGCCAAGAAGCACCAGCTGTGTTATCCACATCCCCTTATACGCCAAGAACACATTGGTCACAAACAATCTTAACCTTTAGAGAACCTATTGCAATAGGGTTTGGAAAAGAAAAGAAGGGTAAACTGGAAGCAATTGGAACTGAGGTGTATCCAGCTGTAAATATCGATTTACGCGTCAGCATTGTCCGTTCTACAGAGCATCGCAGCATTGACATTTCCTTAGAAGCTGCTGGTGTTGGTCCTGGCGGTGAGAAACGGAGTTGGCCTGCTCAGCTTTTCAATCTGCAGTAG 1800 0.4261 MAFIDKQKGEEEKEPYRMEEEEEEDSEEAEEEAWDDWEGERESEFVCLFCDSQYSLCGSLFDHCASLHHFDFHAIRAALKLDFYASFKLINFVRSQVAENKCWSCGLTCQCKRDLQNHLHDIVDFNEMKTLWNDDRYLIPFMQDDSLLYSFGECDEEGEDEQITSIDEDLIKDLMNIDERSSVDHDSVENSKGDLINGKDSMGHALCSDKDPKKGPLVANSPNHIAKHIKKVNEGYFGSYSSFGIHREMLSDKVRMDAYGQAILKNPSLLKGAVVMDVGCGTGILSLFSAKAGASRVIAVEASAKMAAVASQVAKDNGLWWNKSQSGIDGLQKGVMEVVHGMVEEIDKTVELQPHSVDVLLSEWMGYCLLYESMLGSVLYARDRWLKPGGAILPDTATIFVAGFGKGATSLPFWDNVCGFDMSCIGKELVIDAAQIPIVDVLDSQDLVTSSAILQSFDLATMKPDEVDFTTTTTLELKPSASATWCWCYGVVLWFETGFTRRFCQEAPAVLSTSPYTPRTHWSQTILTFREPIAIGFGKEKKGKLEAIGTEVYPAVNIDLRVSIVRSTEHRSIDISLEAAGVGPGGEKRSWPAQLFNLQ* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0257 599 MobiDBLite consensus disorder prediction 1 15 - -
Pvu5g0257 599 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3-RELATED 23 598 - -
Pvu5g0257 599 SUPERFAMILY beta-beta-alpha zinc fingers 30 163 IPR036236 -
Pvu5g0257 599 Gene3D Vaccinia Virus protein VP39 225 394 IPR029063 -
Pvu5g0257 599 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 23 598 IPR025799 GO:0016274|GO:0018216
Pvu5g0257 599 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 239 545 IPR029063 -
Pvu5g0257 599 MobiDBLite consensus disorder prediction 16 34 - -
Pvu5g0257 599 Pfam Methyltransferase domain 275 390 IPR041698 -
Pvu5g0257 599 CDD AdoMet_MTases 275 393 - -
Pvu5g0257 599 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 233 556 IPR025799 GO:0016274|GO:0018216
Pvu5g0257 599 MobiDBLite consensus disorder prediction 1 34 - -
Pvu5g0257 599 Gene3D - 396 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0257 Pvu-Chr5 2233850 2239524 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0257 19 598 C2H2 Transcription Factor Family AT3G12270 56.026 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0257 K11436 - gmx:100781879 963.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0257 5 2233850 2239524 Pvu5g0257 5 2233850 2239524 ECH