Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0253 ATGGCTTTTGGGTTGCCAATGAAGTCTATGGAGCCATCTGTGTGTGGAGACAAGTTGGGTAACCTGATATTGGAAGTAGCTAAGAACTTTGTTATATATATTGGGATGGTGATTGCCTGCAATGGTTTCCATTTTCTACTAAAGCCTTATAAACAACCACGCATTACTTCAGACATAATTGTAGGACTAGTTGTGGGCAACATAGGGTATGTACGCAGGCTGTTTGAGAAATTCAACCTAACGTTTGGATTTATCATTGATTTTGGAATGACATGTTACATGTTCACCCTGGGAATAGAGATGGATCCTTATGTTCTGTTTGCAAGACCAAACAGGTATACTAAAATTGCTGTAGCAGGAGTTGTAAGCACGTTCATCATGGGAGGTCTTATAACTCCAACCTTCAGATACTTTCCAGATCAAAACAAGCTGCTAGAGTTCACCTTAGCCTTCTCCACAATGATTTCTAGCACGGATTCCCCTGTCTTGACCCGTTTGATAACCCAGCTCAAAATAGGAAAATCAGATATTGGGAAGCTTATCATTGGGGCTGCTGTGCACACAGATTTCTTGTGCTGTTTGATGCTTTCCATTGGCTACATAGTTGTGCCAATGCCAGCATACTGTCAAAATTTGCATGCAAGGTTTGAGATTAGGAGGACTGTTCATGTGGTGTTTGTAGTGCTGGTGCAGGTAGGGTTCACAGCCATGGTGTCACCAATGCTTATGAAGTGGGTGAGCAATGAGAACCCTGAAGGTAGACCCATGAAAGGTCCACACTTGGTACTCTCCATTGCCTTCATGGTCTTGATGTGTGCCTCCACCACTGTATATTATTATAATCCAATTTTAAGTGCTTTTCTGGTAGGGCTTTGTGTTCCCAGGGAGGGTAGAGTTTCCAAATGGGTTATCACAAGAATCAACTACATGTTGACCACTATTTTCTTTCCCATCTTTTTCTTGTGGATGGGCTATGTGTCTAATTTCAGGCTGTTTCTTGCACACCATGCTGCAACATGGGTGAGACTAATTGTGGTTTTGCTTGTGGCAACAGCTGGAAAAGTTGTTGGAATAGTCATCTATGGGTTCATGTCTGGCTTTCACTGGCCTGAATCGGTTGCAATAGCAATGCTCCTTGTCACTAAGGGCCATTTGCAGATCTACTTAGCTATGAAAGTGATAGGTTGTGGTGGTGTGACTACTTCCACAGGCATTGTGTTGGTAATGGGAACATTTTTAACAGCTTTACCTGCATCAAGAATTGTAGCAAGCATCATTAGACGAGCAAAGAAAAGAGCACCTACTCATCGTTTGGCACTTCAAATGCTTGACCCCTCAAGTGAGCTAAGGATCCTGGTGTGTGTTCAAAGACCTCAAAATGCTCCTGCTTCCATCAACTTGATGGAGATCACAAAAGGGACGGGTGGCACCGGCATTGTGGTGTATGTCAGTGACATGATTGAACTCACTGCTGAACTATCAGAGACAGTGGATAGGGAAGAAGCAGTGCACAGAGACACAGTGAAAGACAGGGCAGTGATGGAGCTGAGAGACCAAGTTACCACCTTATTCCAAGCCTATGTGAAGGACAATGATGATGGCATCACACTCAAAAGAACCATGACACTCTCAACAATCACTAACATGCCACAAGACATTTGCGTTTTAGCTGAGGACTTGATGATTGCCCTCATCATATTGCCATTCCACAGGAACCAGCGTGAGGATAGAAGGTTGGATGGTGGTAATGCAGGGTTCAGATATGTCAACCGAAAGGTACTGAGAAGTGCTCCTTGTTCTGTTGGGATTCTAGTAGATAGAGGTCTTGGATCAGTTGAAGGTATAAGAGGAGGTGAAGAAACAGTAAACGTGGCAGTGATATTCATTGGTGGAAAAGATGATAGAGAAGCCCTTGCCTATGCTAGCCGTGTAGCGCAGCATCCACAAGTTAAGCTGGAAGTAATAAGATTCCTGGAAGATGATAACAGTGTGGAGTCCTCAGCATTATACAGGATCATCCCTCCAGAGCAGGAGAAAGAGAGGAAATTGGATGATGAATGCTTCACTCAGTTCTACGAAAGGCATGTGATTGGGGGTAGTATTGCATACATGGAGAAGCACCTTGCAAATGCTGCTGAGACATTCTCCACTCTGAGATCCTTTGAAGGGCAATACTCATTGGTGATTGTTGGAAGGGAAGGTGGAATGAACTCAGTTTTGACAAGGGGCATGAATGATTGGCAACAGTGCCCAGAACTTGGACCAATAGGAGATGTTCTTTCTGGATCAGACTTCTCAATGACTATTTCTGTTTTGATCATCCAACAACATAGACTTAGAGGAGAAATAGATGGTTTGGATGAAGATTTCTCTATCATATAA 2382 0.4337 MAFGLPMKSMEPSVCGDKLGNLILEVAKNFVIYIGMVIACNGFHFLLKPYKQPRITSDIIVGLVVGNIGYVRRLFEKFNLTFGFIIDFGMTCYMFTLGIEMDPYVLFARPNRYTKIAVAGVVSTFIMGGLITPTFRYFPDQNKLLEFTLAFSTMISSTDSPVLTRLITQLKIGKSDIGKLIIGAAVHTDFLCCLMLSIGYIVVPMPAYCQNLHARFEIRRTVHVVFVVLVQVGFTAMVSPMLMKWVSNENPEGRPMKGPHLVLSIAFMVLMCASTTVYYYNPILSAFLVGLCVPREGRVSKWVITRINYMLTTIFFPIFFLWMGYVSNFRLFLAHHAATWVRLIVVLLVATAGKVVGIVIYGFMSGFHWPESVAIAMLLVTKGHLQIYLAMKVIGCGGVTTSTGIVLVMGTFLTALPASRIVASIIRRAKKRAPTHRLALQMLDPSSELRILVCVQRPQNAPASINLMEITKGTGGTGIVVYVSDMIELTAELSETVDREEAVHRDTVKDRAVMELRDQVTTLFQAYVKDNDDGITLKRTMTLSTITNMPQDICVLAEDLMIALIILPFHRNQREDRRLDGGNAGFRYVNRKVLRSAPCSVGILVDRGLGSVEGIRGGEETVNVAVIFIGGKDDREALAYASRVAQHPQVKLEVIRFLEDDNSVESSALYRIIPPEQEKERKLDDECFTQFYERHVIGGSIAYMEKHLANAAETFSTLRSFEGQYSLVIVGREGGMNSVLTRGMNDWQQCPELGPIGDVLSGSDFSMTISVLIIQQHRLRGEIDGLDEDFSII* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0253 793 Gene3D - 28 434 IPR038770 -
Pvu5g0253 793 Pfam Sodium/hydrogen exchanger family 32 403 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Pvu5g0253 793 Gene3D - 449 746 - -
Pvu5g0253 793 PANTHER CATION/H+ EXCHANGER 3 14 790 - -
Pvu5g0253 793 PANTHER CATION/H + ANTIPORTER 14 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0253 Pvu-Chr5 2208714 2212107 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0253 13 793 Antiporter Super Family AT3G52080 46.433 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0253 - - gmx:100786469 1258.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0105 11 768765 773336 Pvu5g0253 5 2208714 2212107 PCT