Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0236 ATGCCATTGATCAATGGCTTTGAATTCATGGAATTTCTCAACAAAAAAAAAATTAATATTCCTCTCATCATGATGTCCGCGGATGGTAGCTGGCCTTCCATAATGAAGTCCATTGAAGTTGGAGCTTGTGATTATTGGGTCAAACCCTTGTCTGAGCAACGGCTGGTGAATATGTGGATAGATGTTGTGAAGAACAACATAAAAGATGAGGAGCAAAAAGATATTGGTAGCCAGAAAGATGATGACAGAACAAGAGTGGTTGATGATTGTGATGATGACAGAACAAGAGTGACTGATGATTCTGATGATGATGACTCAGACAGTGCTGATAGTGTACAATGGTCAACAGAACTTAATTTTTTGTTTCACCAGGCTCTCATAAAAATTGGATTGGAAATATCCAAGCCCGAGGATATTCTTGAAGCTATGAACGTGCCAGGTTTGGAACTAGAAGATGTTGAAAGTCATCTAGAG 474 0.3903 MPLINGFEFMEFLNKKKINIPLIMMSADGSWPSIMKSIEVGACDYWVKPLSEQRLVNMWIDVVKNNIKDEEQKDIGSQKDDDRTRVVDDCDDDRTRVTDDSDDDDSDSADSVQWSTELNFLFHQALIKIGLEISKPEDILEAMNVPGLELEDVESHLE 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0236 158 Gene3D - 1 81 - -
Pvu5g0236 158 Gene3D - 107 158 - -
Pvu5g0236 158 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 1 156 - -
Pvu5g0236 158 SUPERFAMILY Homeodomain-like 111 157 IPR009057 -
Pvu5g0236 158 MobiDBLite consensus disorder prediction 70 94 - -
Pvu5g0236 158 MobiDBLite consensus disorder prediction 70 110 - -
Pvu5g0236 158 Pfam Response regulator receiver domain 1 58 IPR001789 GO:0000160
Pvu5g0236 158 ProSiteProfiles Response regulatory domain profile. 1 63 IPR001789 GO:0000160
Pvu5g0236 158 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 156 IPR045279 GO:0009736
Pvu5g0236 158 MobiDBLite consensus disorder prediction 95 110 - -
Pvu5g0236 158 SUPERFAMILY CheY-like 1 64 IPR011006 -
Pvu5g0236 158 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 112 157 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0236 Pvu-Chr5 2007509 2008157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0236 1 158 Response Regulator Gene Family AT2G01760 29.348 2.20e-22 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu5g0236 Response_reg 7.5e-08 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0236 - K14491 pvu:PHAVU_005G022600g 262.307