Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0233 ATGCTGTCTTCAAATGTTGTTTCATCATCATCCCCTCTCACTTTCTCCAAACCCAATCCCCATTTCTTCATGCATGCATCTTCCCATGTCAAACCAAATCTTCTCACCAGGTTTCAGACCCATCACAGACCCACCCCTCTCCAAAGTTCCAAACTTTCTTTCACCCCAACATCTCAGATCCAGCTTTCAATCCCAAAGTTAAGATCTTTCAACCGATTCCTCCCTCCCCCTTTTGAGCCCTCGCCAAGACCCACCCATCAAATCGTTAAGGCTGCCTCTGAACCAAATCCTGGAGGAGAAAATGTCACCCCCACTGCCCCCAAATCCAAGAATCTCAAACTTGCTCTGGTGTTTGGGCTATGGTACTTCCAAAACATTGTGTTCAACATTTACAATAAGAAAGTGTTGAACATTTTCCCTTTCCCATGGCTTCTTGCCTCTTTCCAGCTCTTTGTTGGGTCCATTTGGATGCTGGTGCTTTGGTCCTCCAAGCTCCAACCTTGTCCAAAAATCTCCAAACCCTTCATCGTTGCTCTCCTTGGACCTGCTTTGTTCCACACAATAGGCCACATTTCAGCCTGTGTTTCATTCTCCAAGGTGGCTGTGTCCTTCACCCATGTTATCAAATCAGCGGAACCGGTTTTCTCTGTCATGTTTTCTTCTGTTCTTGGTGATAGGTACCCCATTCAGGTTTGGCTCTCCATTCTGCCCATTGTGCTTGGTTGTTCTTTGGCTGCTGTTACTGAGGTGTCTTTCAATGTACAAGGATTGTGGTGTGCCCTTATTAGCAATGTTGGTTTTGTGTTGAGGAACATCTACTCTAAAAAAAGTTTGCAGAATTTCAAGGAAGTTGATGGCTTGAACTTGTATGGCTGGATTACTATTCTTTCATTCCTCTACCTGTTTCCAGTGGCTGTTTTTGTAGAAGGGTCTCAGTGGATCCCTGGGTATTACAAGGCTATTGAAGCTATAGGGAAACCATCCACATTTTATATCTGGGTGTTGTTGTCTGGGGTTTTCTACCATCTTTATAACCAATCATCATACCAAGCACTGGATGAAATCAGCCCATTATCTTTCTCTGTGGGAAACACAATGAAAAGAGTGGTGGTGATTGTATCTACGGTATTGGTGTTCAGGAATCCGGTTCGACCTCTTAATGGCCTTGGTTCTGCCATTGCAATTCTTGGGACTTTCCTTTATTCACAGGCAACATCCAAAAAGAAAGAAAAGAAGATTGAAGGGGAAAAGAGTAGTTAG 1260 0.4397 MLSSNVVSSSSPLTFSKPNPHFFMHASSHVKPNLLTRFQTHHRPTPLQSSKLSFTPTSQIQLSIPKLRSFNRFLPPPFEPSPRPTHQIVKAASEPNPGGENVTPTAPKSKNLKLALVFGLWYFQNIVFNIYNKKVLNIFPFPWLLASFQLFVGSIWMLVLWSSKLQPCPKISKPFIVALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVMFSSVLGDRYPIQVWLSILPIVLGCSLAAVTEVSFNVQGLWCALISNVGFVLRNIYSKKSLQNFKEVDGLNLYGWITILSFLYLFPVAVFVEGSQWIPGYYKAIEAIGKPSTFYIWVLLSGVFYHLYNQSSYQALDEISPLSFSVGNTMKRVVVIVSTVLVFRNPVRPLNGLGSAIAILGTFLYSQATSKKKEKKIEGEKSS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0233 419 Pfam Triose-phosphate Transporter family 112 402 IPR004853 -
Pvu5g0233 419 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 112 412 IPR004696 GO:0016021|GO:0022857|GO:0055085
Pvu5g0233 419 SUPERFAMILY Multidrug resistance efflux transporter EmrE 293 405 - -
Pvu5g0233 419 PANTHER XYLULOSE 5-PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC 49 415 - -
Pvu5g0233 419 PANTHER SOLUTE CARRIER FAMILY 35 49 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0233 Pvu-Chr5 1985737 1986996 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0233 24 417 Antiporters AT5G17630 67.718 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0233 K15283 - gmx:100101869 701.434