Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0201 ATGTATGGGAGAACAGCTTGCCAACTTGTGAAAGAATTTGCAAGTGGGGATGAAGGCCAGCTTGTGTCATTCAATAGTGACTTGTTTCAACAAGTAGTTGCAGAATGCAGTCAACATCACCTTGAACTTCAGTCCCTGATAAGGAAGATACAGGAAGAAGGTTTGGATATCCAAACAGCAAGAAATGCAGATCACTATGGAGCCCTAATCCACCATCTTGCTTTAGTCCGAAATAAACGTTGCCTAATGGCCTATGTGTATAATCGAGCAGAAACAATACGAAACTTAGTATGGAAGATAGGGCATGTGCTTCCTCAAGAAATTGAAGAGAAGCTTTGTCATGCGGAGGAAGAACATTTCAGGAAGCATTCTACAGCATTGAAATCTTATATGTCGAAAGTCTTGGTTGATCTGACTGTGGATATGGTACCACCAAAAGATCCTTACATCAAAGTAAGGGTTCTTGATGACATTGGAGACGGCATTCTGCTGAGTGATGATAAAACTGCAAATTTTGCCTGCCATTCAATGCATCTTCTGAAGCGAACTGATGCTGAGCAATTTATCTCACGGGGCCAAATGGAGGAACTCACGGGTTAA 600 0.4183 MYGRTACQLVKEFASGDEGQLVSFNSDLFQQVVAECSQHHLELQSLIRKIQEEGLDIQTARNADHYGALIHHLALVRNKRCLMAYVYNRAETIRNLVWKIGHVLPQEIEEKLCHAEEEHFRKHSTALKSYMSKVLVDLTVDMVPPKDPYIKVRVLDDIGDGILLSDDKTANFACHSMHLLKRTDAEQFISRGQMEELTG* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0201 199 Pfam GINS complex protein 47 116 IPR021151 -
Pvu5g0201 199 PANTHER PARTNER OF SLD5 1 195 IPR005339 GO:0000811|GO:0006260
Pvu5g0201 199 Gene3D - 1 134 - -
Pvu5g0201 199 SUPERFAMILY GINS helical bundle-like 1 146 IPR036224 -
Pvu5g0201 199 CDD GINS_A_psf1 3 134 IPR005339 GO:0000811|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0201 Pvu-Chr5 1674787 1679298 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0201 1 199 Core DNA Replication Machinery Family AT1G80190 68.317 6.73e-103 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0201 K10732 - gmx:100780798 332.798