Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0175 ATGGCAATTATGTTGAGTGAAGGAGCTTCTTCATCTTCTGCTTTTGAACGTGGATGGACTTATGATGTGTTCTTGAGTTTCAGAGGTGAAGATACAAGGAGAAGCTTTACAGGCTTTCTATATCATGGTTTGCGCCAAAGTGGTATCAATGTTTTCATTGATGATGATAAGCTTAGGAGAGGGGAAGAGTTATCCCTTGCTCTTCTTGCAGCCATTGAAGAGTCTAGGATTGCTATCATTGTGTTCTCTCAAAACTATGCATCCTCCACATGGTGTCTTGATGAGCTTGCAAAGATCCTTGAGTGTTACAAAACAAGAGGCCAACTTGTGTGGCCAGTTTTCTTTCATGTGGACCCTTCTGAGGTGCGCCATCAGAGAGGAAGTTTTGGAACAGCAATGGCCAAGCATGAAGTCAGATTCAAGGGTAATGTGGAAAAGATGCAAAAGTGGAAGAGAGCATTGTTTGAAGCAGCCAATTTTTCAGGTTGGACCTTAGAAAATGGGTATGAATTTCAGCTTATCCAAGAGATCATTAAGGAGGCCTCTGAAAAGCTAAACCACACCATTTTGCACATTGCTGAATACCCAGTTGGAATAGAGACTCGCATATCAGAAGTGATGCCCCTTTTGCATATTGAACCAGGTGAAGATATTCGTGTCATTGGAATCCATGGACTTGGAGGCATAGGTAAGACAACAATTGCAGGGGCGATATACAACTTGATTGCTGACCAGTTTGAAGCTACAAGTTTCCTTGCTGACATAAGAGAAAGTTCAAATCAAAGACAAGGCTTAGTGCAACTTCAAGAATCACTTCTTTTTGATACAGTTGGGGACAAGAACATCAAGCTGGGAAGCATTTACAAAGGAATCCCTATTATCAAGAAAAGGCTTTGTTGCAAAAAAGTACTTTTGGTTATTGATGATGTTGACAAGTTGGAGCAGCTTCAAGCACTGGCAGGAGGACGCGATTGGTTTGGTTTTGGAAGTGTGATCATTATAACAACAAGGGATAAGCACTTGCTGGCTGCTCATCAGGTTGACAAAACCTATGAAGTAAAGAAACTAAACCATGGTGAAGCTTTTGAACTGTTCACTTGGAGTGCCTTCAAAAGGAAGGCACCTGATGCAGGCTATTTGGAGATTTGTAACCGTGTGGTTCTCTATGCTGAGGGGCTTCCATTGGCTTTGAAAGTAATGGGGTCTACTTTGTTTGGTAAAACAGTGGCAGAGTGGAAATCTGCTCTGGGAAAATATGAAAAGATTCCCAGCAGAGAGGTTCAGAATGTACTAAGAGTAACCTATGATAATCTAGAAGAGAATGAGAAGGAAATTTTCCTTGATGTAGCTTGCTTCTTCAAGGGGGAGACAGTGGAGTATGTAGAGAAGACACTGCAAGCTTGTGGTTTTTATCCAACATTTGGCATCAGTGTACTTATTGATAGATCTCTTGTTAGTATTGATGAATATAACAGATTGAGAATGCATGATCTGATACAAGACATGGGTAGGGAAATCGTTAGAGAAGTTTCACCAATAGAGCCTGGAAAAAGGAGTAGATTGTGGCATCATGAAGATGTTTTTGAAGTACTCACTGAAAATACTGGGACTTATAGAATTCAAGGCATGATGGTGGACCTCCCTGATGACTATATGGTACACTTGAAAGATGATTCCTTCAAGAAGATGAAAAATCTTCAGATTCTTATAGTTAGAAATGGACACTTTTTTGGAAGCCCCCAACATCTTCCAAACAACTTAAGGTTGCTGGATTGGATGAAATATCCTTCATCTTTGCCATCTACTTTTCAACCAAAGAAACTTGTTGTGCTCAACTTGTCAGGAAGTCGTTTTACAATGCAAGAGCCATTCAAGTATTTGGATTCCTTGACTTCTATGGACTTGAGTTCCTGTGAATTGTTGACAAAACTACCTGAAATTTCAAGAGTCCCTAATTTGACAGAACTAAATCTTGACTATTGTACAAATTTAGAAGAACTTCATGAATCTGTTGGATTCCTTGAGAAACTTGTTGAGTTCAGGGCTTATGGATGCACTAAGCTTAAGGTTTTTCCAAGTGCCATCAGGTTGACATCATTGAGAAGTCTTATCCTTAATTGGTGCTCAAGCCTTCAAAATTTTCCTGCTATTTTGGGGAAAATGGATAACCTCATGTCCCTTTCTATAGAAGGCACTGGTATAAAAGAGTTGCCTCCTTCCATTGGAAACCTTTCTGGTCTTCAAGAATTTAGCATGACATCTTGCTTAAACCTCAAGGAACTTCCTCACAACTTTGATATGCTTCAAAGTCTTACAAACCTTGATATGGATGGCTGTCCACAACTTAGAAACTTTTTGACAAAGTTGACAAATATGGGAGAACCTACCCTTACCTTTGGTAACATTCAGTCACTGAATCTAGAAAACTGTGGCCTTGTAGATGAAGATCTTCCCATAATTTTCAATAGTTTCCCAAAATTAGCATCAGTAGTACTCTCAGAAAATAATTTTGTATCTCTTCCAAGCTGCATCCAAGAATGTCCTTGCTTGGAATTACTTCACTTGGACAACTGTAAGAAACTCCAAGAAATTCCAGCATTTCCTCCTAACATGCAATACATTAATGCAAGAAATTGCACATCATTGACTGCAGAGTCATCCAATTTATTATTGAACAAGGAAACTTTTGAGGGATGGGAGTTACAGGTTATGGTGCCTGGAACAAGGGTTCCAGCATGGTTTGACCATGTCACCAAAGGAGAATATATGACATTTTGGGTGCGAGAAAAGTTTCCAGTTATTATCATATGCTTTGCTCTTGAGGTTGAGAGTGAGATGAAGAAGACTTTTAACTGTGAAATTCGATTTTATATAAATGGTGAGGAAGTTTATGAATTGGAAATTCCAAGAGGCTTTTCAGATATGGTGACAGATCATGTGTGGCTCTATGACTTGAGAACTCATTCATCCATCCACTGGCCTAGTCTTGATTTATATCTGATGGATGGCTGGAATCAGGTTGAGATTTCATGTGAGAAGATAAGTGGAGCATCAAATGTGAGTGTGAGTTGGTGTGGAGTTCATGTGTGTAAGCAAGAAGCTAACATGGAGGACATACTACTTACAGATCCTGATGCAGATTTAGATTCAGAGAGTGAAAAAAGCATCAGGTCAACACAAGATTCCCAATATTGCAGAAGAGTAGATGATAACTGCTACATTTTCAATAACTTGGAGGGTTGTGAGACACCTGATATAGCTGCATGCCACACTGGAACTGATCAGAACCAAGATAAGAATTTATTGCATGAAAAGACATTGAATGGTGTTACCAAAGATTCAATGTTATCATTGCCTCATGAAGATATTGGTGGTGTCAAGGCTTCTGGATCAAACATGCTAGTTTCTGATCATCTAGTGAAAGCTCAACCACAATCCCAAGTCACAAGCTTTACACAGACACCTCAAAACAGTAACAGATCCACCATGGTGCTGCCAACAACAGTTGAGTTCTTGGAAAATCAAACCAGCTTGTTGACTATAGATGATGGAGACATGGAGGCATTTTATGCTGTTCTGGATGATGAGATCTCTGTGGTGTCACTTAACAATGACTTCATAGTGGTTTCTGAATTGGCCAACAAAAGGCCAAGTGAAGAGACAAAGAAAGCATTGAAGACACTTCAAGACTGTGTCACCAAACAGTTTTCTGCTCTGTTGGGCCCTGATGAATACAGTACAATGAAAGATACCTTAGAGTACCTCACAAATTTACCAGCAGAAGATGGAATATCAGTGGAAATAAGATCATTGATAATACAAGTTTCAAGACAGTTCACTGATTGGAGTAGGGATTACACATGTGAGAGCAAGAAAATGGAGTCCACCACAGCAAAGTTGTTGAAAGCTGATGAACTAGAAAAGTGTCTTGAAGCTAACAAGATACACTTCAAGGAAGTGGTGTGCATGGAAAATGAGTTGTGCAATGAGTTGGCCTATTTGGAAGAAAGAAAGAGGGAGCTAGAAGAGCAAATAAATGGTGTTAAAGCTAACATCTCTGCTTCACAAGCAGCTAAGAACATGGCTACTCAAAGAAAGAGAGAAGTGTTTGGGGAAGCAAAGATTTTGAAAGCTCAAAGAGATGAGTTGAGGGAACAAGTGCCACACTTGAGAGATGAACATGAATTGGCCATGAAAATTCAGTCAAATATCAGAGATGAATGGTCAAAGCTTGGTGAAAAATTTAACTATGGATTAAGGCATGGAAAAATTGATGAATATTGA 4284 0.3947 MAIMLSEGASSSSAFERGWTYDVFLSFRGEDTRRSFTGFLYHGLRQSGINVFIDDDKLRRGEELSLALLAAIEESRIAIIVFSQNYASSTWCLDELAKILECYKTRGQLVWPVFFHVDPSEVRHQRGSFGTAMAKHEVRFKGNVEKMQKWKRALFEAANFSGWTLENGYEFQLIQEIIKEASEKLNHTILHIAEYPVGIETRISEVMPLLHIEPGEDIRVIGIHGLGGIGKTTIAGAIYNLIADQFEATSFLADIRESSNQRQGLVQLQESLLFDTVGDKNIKLGSIYKGIPIIKKRLCCKKVLLVIDDVDKLEQLQALAGGRDWFGFGSVIIITTRDKHLLAAHQVDKTYEVKKLNHGEAFELFTWSAFKRKAPDAGYLEICNRVVLYAEGLPLALKVMGSTLFGKTVAEWKSALGKYEKIPSREVQNVLRVTYDNLEENEKEIFLDVACFFKGETVEYVEKTLQACGFYPTFGISVLIDRSLVSIDEYNRLRMHDLIQDMGREIVREVSPIEPGKRSRLWHHEDVFEVLTENTGTYRIQGMMVDLPDDYMVHLKDDSFKKMKNLQILIVRNGHFFGSPQHLPNNLRLLDWMKYPSSLPSTFQPKKLVVLNLSGSRFTMQEPFKYLDSLTSMDLSSCELLTKLPEISRVPNLTELNLDYCTNLEELHESVGFLEKLVEFRAYGCTKLKVFPSAIRLTSLRSLILNWCSSLQNFPAILGKMDNLMSLSIEGTGIKELPPSIGNLSGLQEFSMTSCLNLKELPHNFDMLQSLTNLDMDGCPQLRNFLTKLTNMGEPTLTFGNIQSLNLENCGLVDEDLPIIFNSFPKLASVVLSENNFVSLPSCIQECPCLELLHLDNCKKLQEIPAFPPNMQYINARNCTSLTAESSNLLLNKETFEGWELQVMVPGTRVPAWFDHVTKGEYMTFWVREKFPVIIICFALEVESEMKKTFNCEIRFYINGEEVYELEIPRGFSDMVTDHVWLYDLRTHSSIHWPSLDLYLMDGWNQVEISCEKISGASNVSVSWCGVHVCKQEANMEDILLTDPDADLDSESEKSIRSTQDSQYCRRVDDNCYIFNNLEGCETPDIAACHTGTDQNQDKNLLHEKTLNGVTKDSMLSLPHEDIGGVKASGSNMLVSDHLVKAQPQSQVTSFTQTPQNSNRSTMVLPTTVEFLENQTSLLTIDDGDMEAFYAVLDDEISVVSLNNDFIVVSELANKRPSEETKKALKTLQDCVTKQFSALLGPDEYSTMKDTLEYLTNLPAEDGISVEIRSLIIQVSRQFTDWSRDYTCESKKMESTTAKLLKADELEKCLEANKIHFKEVVCMENELCNELAYLEERKRELEEQINGVKANISASQAAKNMATQRKREVFGEAKILKAQRDELREQVPHLRDEHELAMKIQSNIRDEWSKLGEKFNYGLRHGKIDEY* 1428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0175 1427 Gene3D Ribonuclease Inhibitor 710 894 IPR032675 -
Pvu5g0175 1427 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 163 IPR035897 -
Pvu5g0175 1427 SMART till_3 20 160 IPR000157 GO:0007165
Pvu5g0175 1427 Pfam NB-ARC domain 201 425 IPR002182 GO:0043531
Pvu5g0175 1427 Gene3D - 15 189 IPR035897 -
Pvu5g0175 1427 Gene3D - 355 439 IPR042197 -
Pvu5g0175 1427 Gene3D Ribonuclease Inhibitor 531 709 IPR032675 -
Pvu5g0175 1427 PRINTS Disease resistance protein signature 220 235 - -
Pvu5g0175 1427 PRINTS Disease resistance protein signature 297 311 - -
Pvu5g0175 1427 PRINTS Disease resistance protein signature 390 404 - -
Pvu5g0175 1427 PRINTS Disease resistance protein signature 625 641 - -
Pvu5g0175 1427 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 15 1069 - -
Pvu5g0175 1427 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1159 1398 - -
Pvu5g0175 1427 SUPERFAMILY "Winged helix" DNA-binding domain 426 531 IPR036390 -
Pvu5g0175 1427 Coils Coil 1324 1358 - -
Pvu5g0175 1427 ProSiteProfiles TIR domain profile. 19 185 IPR000157 GO:0007165
Pvu5g0175 1427 SUPERFAMILY L domain-like 545 888 - -
Pvu5g0175 1427 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 448 IPR027417 -
Pvu5g0175 1427 Pfam TIR domain 21 188 IPR000157 GO:0007165
Pvu5g0175 1427 Coils Coil 1366 1393 - -
Pvu5g0175 1427 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1159 1398 IPR044974 GO:0006952
Pvu5g0175 1427 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 1069 IPR044974 GO:0006952
Pvu5g0175 1427 Gene3D - 190 353 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0175 Pvu-Chr5 1467555 1473065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0175 15 785 WRKY Transcription Factor Family AT4G12020 31.841 3.27e-91 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0175 - - ccaj:109810288 2328.13