LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu5g0172	ATGGAATCGCCGCAGCCAGGTTCGAGAGGAGCAGAAGCCCTTAAAAATATATCTCCTGGATCATCTATTTCTGTTGCATATCACTCACTTTTTGGACCTCATGATGACCTCCTCCTTCTAGAGCTTGATGAGAAACTTCTCCCAGATGTTCTGCATGAAAGGGTGGTCTTGAGAGGACAGCCTGATGAAGATGCAGTTCTTTGTACTCCATCCAAAACATATGCTATGAAGTTTGTTGGAACTTCCAATTCGGTTCTGCTTGTACCACCAGCAAATCATTCAGAATTTTATGAAAATCCACAAAAGAATGATAGTAATATGGAAGAAGATAAAGTTGTTGCACCCGTAATCAAAGTTGTATCTGGTAATATGGAGCTTGTAGAGACGGCCCCCAGACTTGATAAACTTAAGTCCTTTCTATCAGAAAAGACTTACAATTTTGACGTGGGAAATTTAGAAGACAATCAGGAATCTACAATAGGATTATATAACTGGAATGATCTTGTCAACAATATCCAAGCTAGTGATGAGGAGTTAAGGTCTGGACTGCAGGCTCTTTCAGCAGTGGAGATTAATGGATATTGGAGATTAGTAGATGGGAGTTACATGGACATGATTTTAGGAATGCTTTTGAAAAATTCGGTGTTGAATGATTGGTCACTTAATGCTTTAAACGAAGATGAAGTTGTTTGTACACTGGAATCAGATGGATTTCCTGGGGTGCTAGCAAGGCATTGTTTGCATACATATGGCACCAAACTAAATGAAGGCATGCCTGGCCGTGTCTGGAAGTTGGATGAGAAGCGAGTATGCATACATTTTGCAAAAGAAATCCTGAAAGGGGGCAAAAGGAAGTTAGAGAGTTTCATGGATGAATGGAGGCAGAAGGTTCCAGATGGAATGCAGCCCAGTTTTGATCTTATGGAAGGAGAAGTATTGACAGAGAGAGTTGGAGTTGAGACATGGATTCGCGCCTTCAGCGTTGCATCTTTGCCTTCCACTCCAGCTGAGCGTTTCTCCATTCTTTTCAGAGAGAGGAAAAAATGGGAATGGAAAGATCTGCAGCCCTATGTCAGAGATCTGAAGGTACCAGGTCTTTCTTCAGAAGGTTTGCTACTCAAATACACTCGAAGGACACAACCATCACCTGATGCAGAACCGGTTTTCAGCGCAAGATAG	1179	0.419	MESPQPGSRGAEALKNISPGSSISVAYHSLFGPHDDLLLLELDEKLLPDVLHERVVLRGQPDEDAVLCTPSKTYAMKFVGTSNSVLLVPPANHSEFYENPQKNDSNMEEDKVVAPVIKVVSGNMELVETAPRLDKLKSFLSEKTYNFDVGNLEDNQESTIGLYNWNDLVNNIQASDEELRSGLQALSAVEINGYWRLVDGSYMDMILGMLLKNSVLNDWSLNALNEDEVVCTLESDGFPGVLARHCLHTYGTKLNEGMPGRVWKLDEKRVCIHFAKEILKGGKRKLESFMDEWRQKVPDGMQPSFDLMEGEVLTERVGVETWIRAFSVASLPSTPAERFSILFRERKKWEWKDLQPYVRDLKVPGLSSEGLLLKYTRRTQPSPDAEPVFSAR*	393

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu5g0172	392	Pfam	Sister chromatid cohesion protein Dcc1	38	358	IPR019128	GO:0007064\|GO:0031390
	Pvu5g0172	392	PANTHER	SISTER CHROMATID COHESION PROTEIN DCC1-RELATED	16	392	IPR019128	GO:0007064\|GO:0031390

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu5g0172	10	392	C3H Transcription Factor Family	AT2G44580	56.888	1.09e-160	455

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu5g0172	K11271		-	gmx:100807595	675.241