Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0168 ATGGAGAACCAAAGCACCAACAACAGCTTCTCTCTGTTGGGTCTTCTTCATTCCCTACACTCCTCTGAGCTTCTCAGGGACTTCGCCACGCGAGAACTCAACGCGTTTCTATGGCTTTCTCTTGTTGTTGTCACCACCCTTTTGCTCAGAAGACTCTTTAGCCTCTTTGGGTTATGGCGCAAGGCTAGAACCATTCCCGGGCCTCCCTCTTCCTCTTTTTTTGGCGGCTGCAAGCTCTTTTCGCGCCCAAATTTCACCTTCACTGATGTGTTGTCAGAATCCCATAAAAAGTATGGTCCTATTGTTAAACTGTGGTTGGGTCCTACTCAGCTTTTGGTGTCCGTAAGGGATCCAGTGTTAATCCAAGAGATGCTTATAAAAGCTGAGGATAAGTTGCCTTACACAGGAAAACTGTTTCATCTAGCCTTTGGGCAATCAAGCCTCTTTGCCCCTTCATTTGAAAAGGTGCAAAAGAGAAGGGAATTATTTGCAACAGAATTAAATGAAAGATTGCTGAAGAATGGTGATATGATTCCTCTGAAGGTTGCAGACTTTATCACAGATAAAATAGAAAACATAAAAAAGAAAGGAGGTATTGATTCCAGGTTGGTTTCTCAACATATCGCTTTCACTATAATGGGAGTCACGTTCTTTGGAGATGGCTTCTTGGCCTCGCCGAAGGCTGCAATGTATGAGGAACTGTTCATGACGATCGCGAAAGATGCTTGCTTTTGGGCGTCCTATAATGTTACTCCTTTCTGGAGACAGGAATTTTGGAGGTACCAATGCTTATGCACAAAGTTGAAATGCTTAACTCAAGACATTCTTCAACATTGCAGAAAAGGCTGTAAACTATATGGCCATACTGAGCAAGATGTACATAATGAAAGTTCTAATAAAGAAATGAAGTCAGAAGTTGGTGCACAATGCTCTTCTGACGATGAGTTCCAAGATTACTATTTCTTTCGAGATCTCAAGGATCATCAAGATGGTAAAGAAGAACCTTGTGGGAATGTCATGCGCATGATATTTCATGGATGTCAAACTACATCTGTTCTAATCACGGATGTATTGACTAGGCTTGTCATGCATATGGAAATACAGGATAAGGTTTATTCGGAGATCAGCATAGTAGGAAGAAACCCATCAAAATTTGAGCACGAAAATGTTTATAGGATGCCTTTGTTATTGGCTACAATTTATGAATCTGCACGCCTTCTGCCCACTGGCTCCATGCTGCAGAGGTGCTCTTTGAAACATGACTTGAGCTTTGCAACTGGTGTAACCATACCTGCTGGAGCTGTATTGGTTGTACCTGTTGAATTGGTACAGAAGGATAAGTTTAGTTGGGGGAGTGATGCAAGTCATTTCAATCCTTACCGATTTCTCTCAACTGTTACAAATAAATCAGGTTCTGCTGAAGACCTTTCTAGTACAGGATTCAGTTCATATGTACTAAATGATCCAAATGAAAATGCAGCATTCCTGCCTTTTGGATCTGGTGCACGTGCCTGCATTGGACAGAAATTTATCATCCAACTTGTTGCCTCCGTGTTGGCATCATTGCTAAATAAATATGAGATACGGCTTAGCTCAGGCTTAGATGATGACTCAAACACAACTTTGAAAGATAATCTTCTCCAGCGTCATCCCAGTTCACAGATATTATTCGTGAGAAGGGACCAGTGA 1689 0.418 MENQSTNNSFSLLGLLHSLHSSELLRDFATRELNAFLWLSLVVVTTLLLRRLFSLFGLWRKARTIPGPPSSSFFGGCKLFSRPNFTFTDVLSESHKKYGPIVKLWLGPTQLLVSVRDPVLIQEMLIKAEDKLPYTGKLFHLAFGQSSLFAPSFEKVQKRRELFATELNERLLKNGDMIPLKVADFITDKIENIKKKGGIDSRLVSQHIAFTIMGVTFFGDGFLASPKAAMYEELFMTIAKDACFWASYNVTPFWRQEFWRYQCLCTKLKCLTQDILQHCRKGCKLYGHTEQDVHNESSNKEMKSEVGAQCSSDDEFQDYYFFRDLKDHQDGKEEPCGNVMRMIFHGCQTTSVLITDVLTRLVMHMEIQDKVYSEISIVGRNPSKFEHENVYRMPLLLATIYESARLLPTGSMLQRCSLKHDLSFATGVTIPAGAVLVVPVELVQKDKFSWGSDASHFNPYRFLSTVTNKSGSAEDLSSTGFSSYVLNDPNENAAFLPFGSGARACIGQKFIIQLVASVLASLLNKYEIRLSSGLDDDSNTTLKDNLLQRHPSSQILFVRRDQ* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0168 562 PANTHER CYTOCHROME P450 4C3-RELATED 37 549 - -
Pvu5g0168 562 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0168 562 PRINTS E-class P450 group I signature 354 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0168 562 PRINTS E-class P450 group I signature 495 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0168 562 PRINTS E-class P450 group I signature 505 528 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0168 562 Gene3D Cytochrome P450 59 553 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0168 562 PANTHER CYTOCHROME P450 FAMILY 4 37 549 - -
Pvu5g0168 562 SUPERFAMILY Cytochrome P450 65 560 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0168 562 Pfam Cytochrome P450 66 554 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0168 562 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 498 507 IPR017972 GO:0005506|GO:0016705
Pvu5g0168 562 PRINTS P450 superfamily signature 345 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0168 562 PRINTS P450 superfamily signature 398 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0168 562 PRINTS P450 superfamily signature 496 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g0168 562 PRINTS P450 superfamily signature 505 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0168 Pvu-Chr5 1396464 1401960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0168 35 551 Cytochrome P450 AT1G13710 24.112 1.22e-21 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0168 - - gmx:100809563 913.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0168 5 1396464 1401960 Pvu5g0168 5 1396464 1401960 ECH