Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0152 ATGAGAAAGAAGCTCGACACCCGTTTCCCCGCTGCACGAATAAAGAAGATAATGCAAGCAGATGAGGATGTTGGAAAGATAGCATTGGCAGTTCCTGTTTTAGTATCTAAAGCTCTGGAGTTATTTTTGCAAGATCTCTGTGACCGCACTTATGAAATAACTCTTCAGAGAGGAGCAAAGACCATGAATGCACTGCATTTGAAACATTGTGTACAAAGTTATAACGTATTTGACTTTCTGAGAGACATTGTCAGCAGGGTTCCTGACTATGGGCATGGACATGGCCATTTTGAGGGTGGAGCCGATGATCGTGCCCTTTCAAAGAGAAGGAAAGCTGCTGGTGTTGAGGGCAATGAAAGTGATGAAGAGTCCAAGAGGAGTAAGATGCGTGAGTTGGGCCACACCGGCACTCCCGGTAGGGGAAGAGGCCGAGGTAGAGGAAGAGGCCGTGGTCGAGGGATTCGACCTGTTGAAACAGACATCGGTCATCAGCAGGTTGAGTCTGAGCCTTGCTCCTCTATTCAACAAATTAGCAATGATATTCCTAACACAAGTCTGCCAATAGATAATGGTGTGCAATCCAAGGAGTGTTCAAAGGAGAACTTTGCAGCTCATGAGGAAAGTACTCAATCTTTCCGTAACATCGATCTGAATGCTAACTTAAACGAAAATGAAGACAAAAATGCTAGTGCAGCTGTTCAGGCTTCAGTGCCTGAGCCTGCTGACATGGACATTAAACATGAAGAAATTCCAGGCTGGTCCCTATCTGAAGTCGACAAGATGGCCATTGACACTATGCAACTTGCAACCCTTGGTAGTAGACTAGAAGAGGATGATGAAGATTATGATGAGGAAGGGTAA 861 0.4518 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNALHLKHCVQSYNVFDFLRDIVSRVPDYGHGHGHFEGGADDRALSKRRKAAGVEGNESDEESKRSKMRELGHTGTPGRGRGRGRGRGRGRGIRPVETDIGHQQVESEPCSSIQQISNDIPNTSLPIDNGVQSKECSKENFAAHEESTQSFRNIDLNANLNENEDKNASAAVQASVPEPADMDIKHEEIPGWSLSEVDKMAIDTMQLATLGSRLEEDDEDYDEEG* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0152 286 PANTHER HISTONE SUPERFAMILY PROTEIN 1 285 - -
Pvu5g0152 286 MobiDBLite consensus disorder prediction 95 156 - -
Pvu5g0152 286 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Pvu5g0152 286 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Pvu5g0152 286 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 285 - -
Pvu5g0152 286 MobiDBLite consensus disorder prediction 95 137 - -
Pvu5g0152 286 SUPERFAMILY Histone-fold 4 94 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0152 Pvu-Chr5 1294003 1298897 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0152 1 275 CCAAT-HAP5 Transcription Factor Family AT3G12480 50.174 2.12e-75 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pvu5g0152 CBFD_NFYB_HMF 1.3e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0152 K21752 - gmx:100810093 451.825