Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0144 ATGGGGTTTGAACCATTGAATTGGTACTGCCAGCCAGCACAAAACAGCATTTGGGATAAAGCAGTGGATGGTGCTTTTGGATCCTATACACCTTGTGCAATCAACACTCTTGTTATCTCCATTTCCAATTTGGTTCTTATAGGCCTGTGCTTGTATCGGATATGGCTTATCACTTGCAATGCTAAGGTTCAGAGGTTTTGTTTGAGATCAAATTACTATAATTATCTTCTGGGAATGTTGGCTGCTTATTGTGCTGCTCAACCGTTGTTGAGGTTGTTTACTGGAAATTCCACTTTCAACCTCAGTGGGGAAACAGGCTTCGCTCCTTTTGAGATAGCGGCACTGGTTGTTGAAACACTTACTTGGAGCTCAATGATAACTCTCATCCTCTTGGAAACAAATGTTTATATCAGAAAATTTAGATGGTTGGTGCGTTGTGGAGTTTTATATCTTTTAGTGGGAGATATTGTGGCGGTTAACCTTCTTCTATCAGTGAAAGATTACTGCAGCAGATCTGCTCTGTTTCTGTACATTAGCAGTGTCATCTGCCAGGTGTTGTTTGGTGCCTTACTTTTTGTTTACATTCCTAATTTGGTTCCTTATTCTGGCCATTCGACAATGCACACTGATCTACCCGACCATGGTGAATATGAACCTCTTTGTGGAGAAGATCAAGTTTGCCCTGAGAGGCAAGCCAATGTATTCTCTAGAATAAGTTTTGGATGGATAACTCCACTCATGAAGCAAGGCTACAGAAAACCTGTAACTGAAAAGGATGTTTGGAAGCTAGACAAATGGGATGAAGCAGAGACATTAACTGAGAAGTTCCAAAACTGTTGGAAGTCAGAATTTCAAAGCTCGAACCCGTGTCTTTTAAGAGCATTGAACAGTAGCCTGGGGAAAAGGTTTTGGATGGGAGGCATCTTTAAGATTGGTAATGATCTTTCTCAGTTTGTGGGACCTATTTTGCTGAATCACCTCTTAGATTCAATGCAAAGAGAAGATCCATCCTGGATTGGTTACATCTACGCCTTCTCTATATTTGTTGGAGTGACAGCTGGTGTTCTTTGTGAAGCACAGTATTTTCAGAATGTTATGCGTGTTGGTTTTCGGCTTAGATCAACTTTGGTGGCTGCTATATTTAGAAAATCCTTGAGGTTAACTAATGATGGACGAAAGAAGTGCACATCTGGGAAGCTTATGAATATGATTACAACAGATGCCAATGCATTACAGCAAATATGTCAACAACTTCATGGGCTATGGTCAGCACCATTCCGTATCACTGTAGCCATGGTTCTCCTATACCAGCAACTAGGGGTTGCTTCACTTGTTGGATCATTAATGTTAGTTCTTATTATCCCACTGCAGACATTTGTGATTAGCAGGATGAGAAAACTGACAAAGGAAGGACTGCAACAGACAGACAAAAGGGTTGGTCTGATGAATGAAATTCTATCTGCCATGGATACTGTAAAATGTTATGCATGGGAAACAAGCTTTCAGTCTAGAATTCTAAGCATACGAGATGATGAGCTATCATGGTTCCGCAAAGCCCAGCTGCTATATGCTCTTAATTCTTTTATACTAAACAGCATCCCTGTTCTTGTGACGGTTACCACATTTGGAATTTTCACTTTACTGGGTGGAGAATTGACACCTGCAAGAGCATTTACCTCATTATCTCTGTTTGCAGTTTTGCGCTTTCCTTTAAATATGCTACCAAACTTACTAAGTCAGGTAGCAAATGCACATGTCTCGTTGCAACGTTTGGAGGAACTGTTCTTAGCAGAGGAGAGAAATTTACAACAAAATCCACCTATTGAAACTGGTCTTCCAGCCATCTCAATTGAGAATGGATACTTTTCGTGGGATCCTAAGGAAGAGAAACCAACATTATCAAATATCAATGTGGAAATACCAGTTGGCAGCTTAGTTGCAATCATTGGTGGTACTGGAGAAGGCAAAACGTCTCTCATTTCAGCAATGATTGGAGAGTTACCACCTTTAGCCGATGGAAATGCTACAATTAGAGGCACTGTTGCTTATGTGCCTCAGATTTCATGGATTTACAATGCCACAGTTCGTGAAAACATACTATTTGGATCAAAATTTGAGCATGCACGATATCGGAAGGTCATTGATATCACTGCTTTACAGCATGATCTCAACTCACTACCTGGACTTGATTTTACAGAGATTGGAGAAAGAGGAGTCAATATTAGTGGTGGACAAAAGCAAAGAGTTTCCATAGCCAGGGCTGTATACTCAAATTCAGATGTATATATATTCGATGATCCATTAAGTGCTCTTGATGCTCATATTGCTCAAGAGGTTTTCAGGAACTGTATAAAGGAAGAACTGCGAGGAAAAACCAGGGTTCTTGTCACCAATCAGCTACATTTTCTCCCTCAGGTAGATAAAATCATTCTGGTCAGTGAAGGAATGATTAAGGAGCAGGGAACATTTGAGGAGTTATCAAAAAGTGGGCCTCTATTTCAGAAACTAATGGAAAATGCAGGGAAAATGGAACAACAAGCAGATAATAACGGAGATACTGAAAGTCATGACAAGGATACAGATTTACCCTTGAATAATGAAGCAGTTGTTGAATTACCAAGTGATGCAAGCTATGAGAAGAAAGGAAAATTACGAAAATCAGTACTTGTTAAGAAGGAGGAGAGGGAAACAGGCGTCGTTAGTTGGAGAGTTATAATGCGTTACAAATCAGCACTGGGAGGACTGTGGGTAGTTTCCATACTCTTTGGATGTTATACCTTAACAGAAGTTCTTAGAATTTCAAGCAGCACATGGTTAAGCGTGTGGACATCTCAAGATTCCACTGCAGATAGTAATCCGGCATATTTTCTTTTGATCTATGCACTTTTCTCATTTGGACAGGTATCTGTGGCACTTGCCAACTCTTATTGGTTGATTGTTTCAAGTCTTCGTGCTGCCAAAAGATTGCACAATGCAATGCTGGATAAAATCCTCCGAGCTCCTATGGTATTCTTCCAAACTAATCCGGTTGGTCGCATAATTAATAGGTTTGCAAAAGATACTGGAGATATAGATACCAATGTTTTTAACTTGGTGAACAACTTTTTGGGGCAAGTTTGGCAACTGCTTTCCACATTTGTTCTTATAGGCACTGTGAGCACCATTTCCCTGTGGGCCATAATGCCACTTCTGATCTTCTTTTATGCAGCTTATATATATTATCAGAGCACGGCTCGAGAGGTAAAGCGCATGGATTCCATTACAAGATCTCCTGTTTATGCACATTTTGGTGAATCATTGAATGGTTTGTCAAGCATCCGTGCTTATAAAGCATATGACAGAATGGCACACATTAATGGAAAATACATGGATAACAACATCAGATTCACTCTTGTGAACATAAGCTCAAATCGTTGGCTCACCATAAGGCTAGAAACATTAGGAGGCCTCATGATTTGGATGATAGCAACATCTGCAGTCTTGCAGAATGCAAGGGCTTCAAACCAGGCTTTGTTTGCATCTACAATGGGTCTACTTCTCAGTTATACTTTGAACATAACAAATCTCTTGAGTGGTGTCCTTAGGCAGGCAAGTAGAGCTGAAAACAGTTTAAATGCTGTTGAGCGTGTTGACACATATATAAATCTGGAAAGTGAGGCTCCAGGTGTAATCGAGACCAACCGGCCGCCACCCGGATGGCCAACCTCCGGATCAATTGAGTTTGAAGATGTTGTTCTGAGATACAGGCCTGAACTTCCTCCAGTGCTGCATGGATTGTCCTTCACAGTTCCTCCAACTGAGAAGATAGGGGTGGTTGGAAGAACTGGTGCAGGAAAATCTAGCATGCTTAATGCATTATTTCGGATTGTGGAACTAACAAAAGGAAGAATCATCATTGATGGTTGTGATATTTCTACATTTGGACTAGCAGATCTACGAAAAGTTCTTACTATCATACCACAGTCTCCAGTTCTTTTCTCTGGGACTGTTCGTTTCAATCTTGATCCATTTAATGAGCACAATGATGCTGATCTATGGGAGGCTTTAGAAAGGGCACATCTGAAGGACGTAATAAGAAGAAATCCATTTGGTCTAGATGCTCAGGTTTCAGAGGGAGGAGATAATTTCAGTGTTGGACAGAGGCAACTTCTGAGTCTAGGTAGAGCATTGCTTCGGAGATCGAAGGTTCTTGTCCTGGATGAAGCTACAGCTGCTGTAGATGTTAGAACTGATGCCCTTATACAGAAAACTATCAGACAGGAATTTCAGTCCTGTACAATGCTCATCATTGCACATAGACTAAATACAATCATTGACTGCAATCGGATTCTGCTGCTTGATTCTGGCCGGGTCCTTGAATACAGTTCTCCAGAGGAACTCCTACAAAATGAAGGAAGTGCTTTCTACAAGATGGTTCAAAGTACTGGTGAAGCAAATGCTGAGTATCTATGTAGCCTAGTATTTGGAAGAACAGAGAACAATGATGAATATAAGAAGGAGTTAGAAAACCATATGAGACAATTAGCTTCTACTCACTGGACTGCTGCTACACAGTTTGCCATAGCTTCTACCCTTTCTTCATTACACCATCTGCTTCAAAAACCAAGTGGTGAAGACAATGGAGATATCCTTGATAAAACAAAGGATGCAGCTACAACACTTCAAGAGGTTCTGATGGGGAAGCATGATGAAGCCATAGAAGAGACACTGCATAAATACCATATTCCAACAGATAGATGGTGGTCTACTCTCAACAAAGTTATTGAAGGTCTTGCTATCTTGAAGAGGTTGCCTAAAGACAACATTCAACAAATACAACTTGATTTTGATGGAAGATCTTTTCAATAA 4848 0.4053 MGFEPLNWYCQPAQNSIWDKAVDGAFGSYTPCAINTLVISISNLVLIGLCLYRIWLITCNAKVQRFCLRSNYYNYLLGMLAAYCAAQPLLRLFTGNSTFNLSGETGFAPFEIAALVVETLTWSSMITLILLETNVYIRKFRWLVRCGVLYLLVGDIVAVNLLLSVKDYCSRSALFLYISSVICQVLFGALLFVYIPNLVPYSGHSTMHTDLPDHGEYEPLCGEDQVCPERQANVFSRISFGWITPLMKQGYRKPVTEKDVWKLDKWDEAETLTEKFQNCWKSEFQSSNPCLLRALNSSLGKRFWMGGIFKIGNDLSQFVGPILLNHLLDSMQREDPSWIGYIYAFSIFVGVTAGVLCEAQYFQNVMRVGFRLRSTLVAAIFRKSLRLTNDGRKKCTSGKLMNMITTDANALQQICQQLHGLWSAPFRITVAMVLLYQQLGVASLVGSLMLVLIIPLQTFVISRMRKLTKEGLQQTDKRVGLMNEILSAMDTVKCYAWETSFQSRILSIRDDELSWFRKAQLLYALNSFILNSIPVLVTVTTFGIFTLLGGELTPARAFTSLSLFAVLRFPLNMLPNLLSQVANAHVSLQRLEELFLAEERNLQQNPPIETGLPAISIENGYFSWDPKEEKPTLSNINVEIPVGSLVAIIGGTGEGKTSLISAMIGELPPLADGNATIRGTVAYVPQISWIYNATVRENILFGSKFEHARYRKVIDITALQHDLNSLPGLDFTEIGERGVNISGGQKQRVSIARAVYSNSDVYIFDDPLSALDAHIAQEVFRNCIKEELRGKTRVLVTNQLHFLPQVDKIILVSEGMIKEQGTFEELSKSGPLFQKLMENAGKMEQQADNNGDTESHDKDTDLPLNNEAVVELPSDASYEKKGKLRKSVLVKKEERETGVVSWRVIMRYKSALGGLWVVSILFGCYTLTEVLRISSSTWLSVWTSQDSTADSNPAYFLLIYALFSFGQVSVALANSYWLIVSSLRAAKRLHNAMLDKILRAPMVFFQTNPVGRIINRFAKDTGDIDTNVFNLVNNFLGQVWQLLSTFVLIGTVSTISLWAIMPLLIFFYAAYIYYQSTAREVKRMDSITRSPVYAHFGESLNGLSSIRAYKAYDRMAHINGKYMDNNIRFTLVNISSNRWLTIRLETLGGLMIWMIATSAVLQNARASNQALFASTMGLLLSYTLNITNLLSGVLRQASRAENSLNAVERVDTYINLESEAPGVIETNRPPPGWPTSGSIEFEDVVLRYRPELPPVLHGLSFTVPPTEKIGVVGRTGAGKSSMLNALFRIVELTKGRIIIDGCDISTFGLADLRKVLTIIPQSPVLFSGTVRFNLDPFNEHNDADLWEALERAHLKDVIRRNPFGLDAQVSEGGDNFSVGQRQLLSLGRALLRRSKVLVLDEATAAVDVRTDALIQKTIRQEFQSCTMLIIAHRLNTIIDCNRILLLDSGRVLEYSSPEELLQNEGSAFYKMVQSTGEANAEYLCSLVFGRTENNDEYKKELENHMRQLASTHWTAATQFAIASTLSSLHHLLQKPSGEDNGDILDKTKDAATTLQEVLMGKHDEAIEETLHKYHIPTDRWWSTLNKVIEGLAILKRLPKDNIQQIQLDFDGRSFQ* 1616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0144 1615 SMART AAA_5 1265 1458 IPR003593 -
Pvu5g0144 1615 SMART AAA_5 642 822 IPR003593 -
Pvu5g0144 1615 SUPERFAMILY ABC transporter transmembrane region 292 591 IPR036640 GO:0005524|GO:0016021
Pvu5g0144 1615 Pfam ABC transporter 633 768 IPR003439 GO:0005524
Pvu5g0144 1615 Pfam ABC transporter 1256 1404 IPR003439 GO:0005524
Pvu5g0144 1615 CDD ABC_6TM_ABCC_D1 306 591 IPR044746 GO:0140359
Pvu5g0144 1615 Pfam ABC transporter transmembrane region 304 571 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu5g0144 1615 Pfam ABC transporter transmembrane region 920 1164 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu5g0144 1615 CDD ABCC_MRP_domain1 615 815 - -
Pvu5g0144 1615 Gene3D - 1223 1475 IPR027417 -
Pvu5g0144 1615 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1239 1473 IPR003439 GO:0005524
Pvu5g0144 1615 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 38 1494 - -
Pvu5g0144 1615 MobiDBLite consensus disorder prediction 849 864 - -
Pvu5g0144 1615 MobiDBLite consensus disorder prediction 843 864 - -
Pvu5g0144 1615 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 304 583 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu5g0144 1615 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 920 1202 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu5g0144 1615 Gene3D ABC transporter type 1, transmembrane domain 293 592 IPR036640 GO:0005524|GO:0016021
Pvu5g0144 1615 CDD ABC_6TM_ABCC_D2 918 1214 IPR044726 GO:0140359
Pvu5g0144 1615 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 613 838 IPR027417 -
Pvu5g0144 1615 ProSitePatterns ABC transporters family signature. 1376 1390 IPR017871 GO:0005524
Pvu5g0144 1615 PANTHER ABC TRANSPORTER C FAMILY MEMBER 11-RELATED 38 1494 - -
Pvu5g0144 1615 Gene3D - 593 865 IPR027417 -
Pvu5g0144 1615 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 615 839 IPR003439 GO:0005524
Pvu5g0144 1615 Gene3D ABC transporter type 1, transmembrane domain 880 1220 IPR036640 GO:0005524|GO:0016021
Pvu5g0144 1615 CDD ABCC_MRP_domain2 1237 1457 - -
Pvu5g0144 1615 ProSitePatterns ABC transporters family signature. 741 755 IPR017871 GO:0005524
Pvu5g0144 1615 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1229 1473 IPR027417 -
Pvu5g0144 1615 SUPERFAMILY ABC transporter transmembrane region 902 1219 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0144 Pvu-Chr5 1158388 1176819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0144 560 831 Calmodulin-binding Proteins AT2G36910 26.027 9.88e-23 104