Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0141 ATGACTACAGAAACTCAGAGGGTAGTGGTGATCCAGGATGCATCAAGAGGTGTTAGTTCAAAGGCTATCCTTGGAGCCCTGGAAAAGTTTTCTGTTAAAGCTGGAGATCAGCTTATAATTGTTGCTATCCTTGATTGGATTAGCAGTCCCATGGGTTACATGGTCAGACTTGATACCAGCTCAACAAACCAGAAAATAATTGCAAAATGGCATACCAAAAAAAAGAAAGAATATCTTATGAACGAGAAGATCAAGGAGATCTCCAACTACTGTAAATCGAATGAGATTGGATTCCAAATTGAAGTGCTTGTAGGCCCTACTGCAGAAGTTGCTTCTAATGCTGCCAAGGATTTTCAGGCGACAACTTTGATTTTATTTAGACAGATCCACAAAGATTTGAAGTATTTCATGCGCCAGCATCCTTGTGGCATGTATAGGATAACAAGTGACAATTCAATTGAGAGGTTGAAAGATCCAAAATCAACATCCAGCACCAAATCACTTGTTGACAGGCAAGAAAATGTAAGCTATAAAGAAATGTTTCCAGGAAGTGAAGAGGAAGAACGTTCTCTTCAGATGTCCAGGTCTTCATCAAGTGATATGTTGACATCATTTGGAGTCTCAAGTCAGTGGAGTACAGAACTCTCCACTTCAAGTTTCAGAAGCTTGCGGTATGGCCAGCAATACCAAGAGGGAAATCTCTATTCAAATATAGAACAAGAAACAGCAGGGAACCAATCACTATTTCACATTTCAGAGAATGAAGAAATTAACCAATTGAAAGAAAATAAAAGAGAGAACTACGGTAGAAATAATGAAAAATCTCATACGGAGGAAGAATTTGCAAATCCACTTTGTTCTGTGTGCAATAATAGACGACCAAAAGTTGGATTGAAGAGAGATTTTACTTATGCAGAGCTCTGTGCTGCTACAAAAGGATTTTCTCCCAAGAACTTTCTGTCAGAAGGAGGATTTGGATCTGTCTACAAAGGACTGCTTAATGGAATGAAGATTGCTGTTAAGCAGCATAAAAATGCAGGATTCCAAGGAGAGAAGGAATTTAAGTCAGAAGTGAATGCACTTAGCAAAGCAAGACATGAGAATGTGGTTGTGCTGCTAGGCTCATGCTCAGAAGGAACTAATAGGCTTCTTGTGTATGAATATGTTTGCAATGGCTCACTTGACCAACATCTATCAGAACACTCTCGATCACCTCTTAGTTGGGAAGATAGGATCAATATAGCAATAGGAGCTGCCAAAGGGTTACTATACTTACACAAGAACAACATGATACACAGAGATGTGAGACCAAACAATATCCTTATAACACATGATCATCGACCATTGCTAGGAGACTTTGGATTAGCAAGAAATCAAAATGAAGACTCAATACACTCAACAGAAGTTGTTGGAACTTTGGGGTATTTGGCACCAGAATATGCTGAACATGGGAAAGTTTCCAGCAAAACAGATGTATACTCTTTTGGAGTGGTTTTACTACAGCTAATAACAGGAATGAGAACTACTGATAGAAGACTTGAAGGAAGAAGTCTTGTGGGATGGGCAAGGCCACTTTTAAGAGAGAGGAACTATCCAGATTTAATTGATGAAAGGATCATTCGGTCTCATGATGTCCATCAACTATTTTGGATGGTTCGGATAGCAGAGAAATGTCTAAGCAGGGAGCCTCAGAGGAGACTAAATATGATTCAGGTTGTTGATGCTTTGACTGACATAGTGGAAGGCAGAACATGTGACATCATATTAAGAGATTACTCCCCTGCAAGATCAGATTCGATTTATACTGCATCAGACTCTGATGAATCTGAAGATGAAATGAAGGAATCCTTCAAATTTGAAGATGAATTAATAGCTCACAGCCACAGTTCAGAATCCATAGATAGTAATAGCATAAGTCTGATGATGCACATGAATTTAAGACAGCCACCATCCCCTCCAATTCAGAGCATCCCTCTAAGTAGCTCATGCTTTCATGATGAGTCAACTAGTAATGGTGAAGCAATGGAAATTTCAAAATCCAATGAGGTTTCTCAATTGTTAGATGCTAGGCTTAGTATATAG 2082 0.39 MTTETQRVVVIQDASRGVSSKAILGALEKFSVKAGDQLIIVAILDWISSPMGYMVRLDTSSTNQKIIAKWHTKKKKEYLMNEKIKEISNYCKSNEIGFQIEVLVGPTAEVASNAAKDFQATTLILFRQIHKDLKYFMRQHPCGMYRITSDNSIERLKDPKSTSSTKSLVDRQENVSYKEMFPGSEEEERSLQMSRSSSSDMLTSFGVSSQWSTELSTSSFRSLRYGQQYQEGNLYSNIEQETAGNQSLFHISENEEINQLKENKRENYGRNNEKSHTEEEFANPLCSVCNNRRPKVGLKRDFTYAELCAATKGFSPKNFLSEGGFGSVYKGLLNGMKIAVKQHKNAGFQGEKEFKSEVNALSKARHENVVVLLGSCSEGTNRLLVYEYVCNGSLDQHLSEHSRSPLSWEDRINIAIGAAKGLLYLHKNNMIHRDVRPNNILITHDHRPLLGDFGLARNQNEDSIHSTEVVGTLGYLAPEYAEHGKVSSKTDVYSFGVVLLQLITGMRTTDRRLEGRSLVGWARPLLRERNYPDLIDERIIRSHDVHQLFWMVRIAEKCLSREPQRRLNMIQVVDALTDIVEGRTCDIILRDYSPARSDSIYTASDSDESEDEMKESFKFEDELIAHSHSSESIDSNSISLMMHMNLRQPPSPPIQSIPLSSSCFHDESTSNGEAMEISKSNEVSQLLDARLSI* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0141 693 ProSitePatterns Tyrosine protein kinases specific active-site signature. 430 442 IPR008266 GO:0004672|GO:0006468
Pvu5g0141 693 PANTHER OS01G0253100 PROTEIN 13 605 IPR045271 GO:0004714|GO:0006468
Pvu5g0141 693 Pfam Protein tyrosine and serine/threonine kinase 319 575 IPR001245 GO:0004672|GO:0006468
Pvu5g0141 693 PANTHER TYROSINE KINASE FAMILY PROTEIN 13 605 - -
Pvu5g0141 693 ProSiteProfiles Protein kinase domain profile. 314 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0141 693 Gene3D Transferase(Phosphotransferase) domain 1 389 589 - -
Pvu5g0141 693 SUPERFAMILY Protein kinase-like (PK-like) 300 593 IPR011009 -
Pvu5g0141 693 Gene3D Phosphorylase Kinase; domain 1 287 388 - -
Pvu5g0141 693 SMART tyrkin_6 314 576 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0141 Pvu-Chr5 1139235 1144375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0141 302 582 Trihelix Transcription Factor Family AT5G38560 45.667 3.15e-75 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pvu5g0141 PK_Tyr_Ser-Thr 6.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0141 - - gmx:100794450 1054.66