Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0135 ATGGAAGGAAGGATAGGGAAGAACTCAGTTCCTCTTCATGGTTCCATTGATAAGTCTAAGATTCTGGATGTTAAACCTCTGAAGAGTTTGATTCCTATTTTCTCCATGTCTTCTCAAACTCCACCTCTTGGTCAGTATCCTTCTGGGTTTTCTCCATTTTTTCCTTTTGGTGCACCTCAGCAAACTCCAACTGAGGTGACACCAAATGGTGCTGCTACTCCAATAAGGGCATATAGGAGTACACCATGGGCAGGAGACACCAGTTCAACCATGGAGGGTTTCAGTGATCAGCATACTTCTGGGAAGAAAAAACGTGGATCTCCAAAGTCGCGCAGTGCCAAATTATCCTTAGATAAGCCTAAGAGAAGTCAAGAGCCCCCTGTTGATTTAGGTGCTTTGGTTGGTATTAGCCCTGCTCAAAAAGATGATGGTAGCCGTGAAATGGTTAATTTTGTTCTCATGGCGTTTGATGCTCTTAGAAGAAGGCTCTGCCAACTTGAAGAGGCCAAGGAATTGAGCTTGGGTTCGGTCAAGCGTGCAGATTTGAAAGCTTGCAGTATTTTGATGACCAGAGGAATCCGGACAAACATGAGGAAGAGAGTAGGATCAGCTCCTGGGGTTGAGATTGGGGACATTTTCTTTTTCAGAACAGAAATGTGTGTTGTGGGTTTGCATTCTCCCTCCATGAGTGGAATTGATGTCTTGCATATTAGGGGTGAGTTTGAGGAGGAAACTCTGGCTGTGAGCATTGTTTCATCAGGAGAATATGATGATGATGCTGAGGATATCGATGTTATAACTTATACTGGTCACGGAGGGAACTTCTTCAAGAAAGATAAGCACGCCATTGACCAGAAGCTTCAAAGGGGTAATCTTGCTTTGGATAGGAGTTCACGAGAACTCAATGAAATAAGAGTCATCCGGGGCATTAGGGATGCTGTGAATCCAAATGCAAAAGTCTATGTCTATGATGGTCTGTATAAAATCGAAGATTCATGGATTGGAAAAGCAAAAGGTGGTGGTGATGTATTTAAGTACAAGTTGGCAAGAATGTCTGGACAGCCTAGTGCCTATTCTGTTTGGAAATCAGTTCAGAAGTGGAAATCTGGCTCGTCAAGAACTGGACTTATTCTTGCAGACATTTCCAATGGAGCTGAGAGTATTCCTGTAGCACTTTTCAATGAGGTTGATAATGTGAAGGCACCTATTTATTTCAATTATTTCCATTCTCTTAGACACCCTAAATCATTCAGTTTGATGCAGCCTTCAAATGGGTGCACTTGTACTAAAGCTTGTGTCCCAGGTGATTTGAACTGTGCTTGCATTAGGAGAAATGAAGGTGATTTCCCATATACTGGAAATGGTGTTCTGGTGAACCGGATGCAATTGGTTCATGAATGTGGTCCCACATGTCAGTGTTTTCCTAACTGCAAAAATAGAGTATCCCAAACCGGTTTGAAGCACCAAATGGAAGTGTTCAAAACTAAGGATAGAGGGTGGGGTCTTCGGTCTCTGGATCCTATTCGTGCAGGCACTTTCATTTGTGAATATGCTGGAGAAGTTGTTGATAGAGCCAAGGTAAGTGAGCTTGTGAGGGAAGGAAATGAGTATGTTTTTGATACAACTCGGATTTATGGTCAATTCAAATGGAATTATGAGCCTAGGCTTTTGGAAGAAGTCAATCCAAATGAATCCAGTGAGGATTATGCCATGCCGTATCCTTTAGTTATAAGTGCCAAGAGTTTTGGGAATGTGGCTAGATTCATGAATCATAGTTGCTCCCCAAATGTTTTTTGGCAGCCTGTGGTATATGAAGAAAACAACCAATCGTACATGCATGTTGCCTTTTTTGCACTCAGACACATTCCACCAATGACGGAGTTAACATATGATTATGGAGTTTCCCGATCTGATCATGCTGAGGGTATCAGTGCAGCCAAAGGGAGAAAGAAATGCTTATGCCAATCATTAAAATGCTGTGGTTTTTATGGTTAA 1995 0.4221 MEGRIGKNSVPLHGSIDKSKILDVKPLKSLIPIFSMSSQTPPLGQYPSGFSPFFPFGAPQQTPTEVTPNGAATPIRAYRSTPWAGDTSSTMEGFSDQHTSGKKKRGSPKSRSAKLSLDKPKRSQEPPVDLGALVGISPAQKDDGSREMVNFVLMAFDALRRRLCQLEEAKELSLGSVKRADLKACSILMTRGIRTNMRKRVGSAPGVEIGDIFFFRTEMCVVGLHSPSMSGIDVLHIRGEFEEETLAVSIVSSGEYDDDAEDIDVITYTGHGGNFFKKDKHAIDQKLQRGNLALDRSSRELNEIRVIRGIRDAVNPNAKVYVYDGLYKIEDSWIGKAKGGGDVFKYKLARMSGQPSAYSVWKSVQKWKSGSSRTGLILADISNGAESIPVALFNEVDNVKAPIYFNYFHSLRHPKSFSLMQPSNGCTCTKACVPGDLNCACIRRNEGDFPYTGNGVLVNRMQLVHECGPTCQCFPNCKNRVSQTGLKHQMEVFKTKDRGWGLRSLDPIRAGTFICEYAGEVVDRAKVSELVREGNEYVFDTTRIYGQFKWNYEPRLLEEVNPNESSEDYAMPYPLVISAKSFGNVARFMNHSCSPNVFWQPVVYEENNQSYMHVAFFALRHIPPMTELTYDYGVSRSDHAEGISAAKGRKKCLCQSLKCCGFYG* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0135 664 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH1 14 662 - -
Pvu5g0135 664 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 14 662 - -
Pvu5g0135 664 MobiDBLite consensus disorder prediction 79 129 - -
Pvu5g0135 664 Gene3D - 184 370 IPR036987 -
Pvu5g0135 664 ProSiteProfiles YDG domain profile. 202 350 IPR003105 -
Pvu5g0135 664 Pfam SAD/SRA domain 201 354 IPR003105 -
Pvu5g0135 664 SMART G9a_1 197 354 IPR003105 -
Pvu5g0135 664 ProSiteProfiles SET domain profile. 488 633 IPR001214 GO:0005515
Pvu5g0135 664 SUPERFAMILY PUA domain-like 184 371 IPR015947 -
Pvu5g0135 664 MobiDBLite consensus disorder prediction 111 125 - -
Pvu5g0135 664 ProSiteProfiles Pre-SET domain profile. 424 485 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Pvu5g0135 664 Gene3D SET domain 371 663 IPR046341 -
Pvu5g0135 664 Pfam SET domain 499 633 IPR001214 GO:0005515
Pvu5g0135 664 SMART set_7 488 639 IPR001214 GO:0005515
Pvu5g0135 664 SUPERFAMILY SET domain 373 639 IPR046341 -
Pvu5g0135 664 Pfam Pre-SET motif 381 480 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Pvu5g0135 664 SMART preset_2 378 472 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Pvu5g0135 664 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 58 664 IPR025794 GO:0016571
Pvu5g0135 664 MobiDBLite consensus disorder prediction 82 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0135 Pvu-Chr5 1064070 1067285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0135 1 664 Su(var)3-9 homologs AT1G73100 49.927 0.0 675
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pvu5g0135 SAD_SRA 6.9e-45 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0135 K24405 - gmx:100812173 1112.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0135 5 1064070 1067285 Pvu11g1977 11 46694239 46696240 PCT