Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0131 ATGGATTCTATGGATGCTGTTATTTTCTGTGATGACCCTTCAAAGAGAAACGTTGAAGAAGAGAGTGAAGAAGAAGTGGTGACAGTGGAGGAACTGGAGAGAAGGATGTGGAGGGATCGCATGATGTTGAGGAAGCTTAAGGAGGAGAAGAGGGAAAAGGAGAAAGGAGAAACAATGGAGATGATGAAGAAGAAGGCATTGATTCGTGCACAAGACACAGTGCTGAAGAACATGGTGAAGATGATGGAGATTTGTGGTGCTCGTGGCTTCGTCTATGGCATCATTCCTGAGAAGGGAAAACCAGTAAGTGGAGCTTCTGATAACCTCAGAGCTTGGTGGAAAGAAAGGGTCAAGTTTGATCATAATGGTCCTGCTGCTATACAAAGGTATGAGGAAGAAAGTGGGTTTGATGACATGGTTGGTGATGCATTCGATGGAGAGTCACCAACAACATACACTCTGAGTGATCTCCCAGACACAACTCTTGGCTCACTCTTGTCATCTCTAATGCAGAACTGTGACCCTCCCCAGAGGAGGTACCCTTTGGACAAGGGCACTGCCCCTCCCTGGTGGCCCACTGGGCAGGAATGGTGGTGGGCCCAGATGGGCTTTTCCATGGACCCAGGCCCACCTCCCTACAAGAAGCCCCATGACCTCAAGAAGGTGTGGAAGATCTGTGTGCTCATTGCAGTCATCAAACACATATCCCCAGACATAGCAAAGATCAGAAACATTGTGCTTCACTCTAGGACCCTTCAGGACAAGCTCACTGCCAAAGAAACTGCCATTTGGAATGCCATTGTGAAGCGTGAAGAGTCCTTCGCTAGGAGATCATACCCTCATTTCTTCCACCATACCCTCCCACCAAGACCACCACCAATTGCCTATGATAAAAAATTTACAAATTTTCTTGGAGGACTCAACAACAAACCACAACCCAACAATGTTGCTAATGTTGGAGCAAGAAATTTCTTTGTGGGCCAGTTCAATCCACCACCACCAACAAGCAATGTTGCAATTGCTAATGGCAATAACAATAACAATAACATGCTTACAATGATGAACAGAGGCACTGTCATGCCACTAGACCATGCTGTTGAAAAGAGAAAGGGTGGAGATGTTCAAGGTATTACATTTCCTCATCAGGCTTATTCTTGCCATAACATCGAGTGTGGCTTTGGGTTCAGTGACAGGAACACGAGGAACAATCATCAGCTGACATGCCAATACAGAAGCAGAAATCCTCTGCAAGTGGTTGGAAGTGACAGGAACATTGGTGCATCAGTTACTAATCAAAATCAGAGTTTCACTGACATGGGGTGTGGTGTGATGAACAACATGAATGTTGAGCAGAAGCAATCCACAGGTGTTGGAAGTAGCATGAATGTTGCTCCTCTTGCAGGCCAAAACCAGAATGTGCAAAGAGTTCAGACTGAGGAGAATGGTTTGTTTGATGGAAGGTTTTGTTTGGAGAAGGATATGTTTGGCAGCAACATGTATGTGCCTTCTTTAGCAAGCAAAACAGAGCAGCAGGTGCAAAATGTTCACAGTTTGAATGGGAATTTGTCAACATCGATAATAGTAGATCCTCCCATTGCATGGGATGCAAACAATTCCCAAGCTGAATTTTTGGACTCTCCTTTGTTGACAACACCGGATAAGGATATTCTTTGGCCATAA 1680 0.4512 MDSMDAVIFCDDPSKRNVEEESEEEVVTVEELERRMWRDRMMLRKLKEEKREKEKGETMEMMKKKALIRAQDTVLKNMVKMMEICGARGFVYGIIPEKGKPVSGASDNLRAWWKERVKFDHNGPAAIQRYEEESGFDDMVGDAFDGESPTTYTLSDLPDTTLGSLLSSLMQNCDPPQRRYPLDKGTAPPWWPTGQEWWWAQMGFSMDPGPPPYKKPHDLKKVWKICVLIAVIKHISPDIAKIRNIVLHSRTLQDKLTAKETAIWNAIVKREESFARRSYPHFFHHTLPPRPPPIAYDKKFTNFLGGLNNKPQPNNVANVGARNFFVGQFNPPPPTSNVAIANGNNNNNNMLTMMNRGTVMPLDHAVEKRKGGDVQGITFPHQAYSCHNIECGFGFSDRNTRNNHQLTCQYRSRNPLQVVGSDRNIGASVTNQNQSFTDMGCGVMNNMNVEQKQSTGVGSSMNVAPLAGQNQNVQRVQTEENGLFDGRFCLEKDMFGSNMYVPSLASKTEQQVQNVHSLNGNLSTSIIVDPPIAWDANNSQAEFLDSPLLTTPDKDILWP* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0131 559 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 16 504 - -
Pvu5g0131 559 Gene3D - 56 132 IPR023278 GO:0003700|GO:0005634
Pvu5g0131 559 ProSiteProfiles Zinc finger C2H2 type domain profile. 384 415 IPR013087 -
Pvu5g0131 559 Gene3D - 149 282 IPR023278 GO:0003700|GO:0005634
Pvu5g0131 559 Coils Coil 15 49 - -
Pvu5g0131 559 SUPERFAMILY DNA-binding domain of EIN3-like 152 275 IPR023278 GO:0003700|GO:0005634
Pvu5g0131 559 Pfam Ethylene insensitive 3 30 272 IPR006957 GO:0005634
Pvu5g0131 559 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 16 504 IPR006957 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0131 Pvu-Chr5 1035395 1038835 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0131 3 415 EIL Transcription Factor Family AT3G20770 45.266 2.73e-116 356
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Pvu5g0131 EIN3 1.1e-104 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0131 K14514 - gmx:100785984 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0131 5 1035395 1038835 Pvu5g0131 5 1035395 1038835 ECH
Pvu6g0114 6 5490545 5493674 Pvu5g0131 5 1035395 1038835 ECH