Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0124 ATGGGTTCGCTCGAAACCCCAACCGGTTCCGGTCCTTCCGCCGGCAACGGCAAATCCACCTCCGTCGACGCCGCGGAGGCGCCGCCGGAGCCCGACATGTCGAAGCGGCGGAGATCATCGGTGCTCCCCCTGGAAGTCGGCACTCGTGTCATGTGCCGGTGGAGGGACAGCAAGTACCATCCCGTTAAGGTCATCGAACGCCGCAAGGTTTCCAACGCTATCCCCGGCGACTACGAGTATTACGTCCATTACACCGAGTTCAATAGAAGGCTTGACGAGTGGGTTAAGCTTGATCAGCTAGATCTTGATTCAGTGGAGGCGGTTGTCGATGAGAAAGTGGAGGAGAAGGGGGCGTCTGGCTTGAAGATGACACGCCATCAAAAGAGGAAGATTGACGAGACACATGTAGAGGGACATGAGGAACTTGATGCTGCCAGTTTGCGAGAACACGAGGAATTTACAAAAGTGAAAAATATAGCTACTATTGAACTTGGAAGATATGAGATTGAGACATGGTACTTCTCCCCATTCCCACCAGAATACAATGACTGTTTGAGGCTGTACTTTTGTGAGTTTTGCCTCAATTTCATGAAGCGCAAAGAACAGCTTCAGAGGCATATGAGGAAATGCGATCTGAAGCATCCCCCTGGTGATGAGATATACAGAAGTGGCACACTTTCAATGTTTGAGGTTGATGGAAAGAAGAACAAGGTTTATGGGCAGAATCTTTGTTATCTGGCGAAGTTATTTCTTGATCACAAGACCCTCTATTATGATGTTGATCTGTTTCTGTTCTATGTTTTGTGTGAATGTGATGATCGAGGTTGTCACATGGTTGGCTATTTCTCCAAGGAAAAACATTCTGAGGAATCTTACAATTTGGCATGTATCCTCACCCTTCCACCTTACCAAAGGAAAGGCTATGGCAAATTTCTAATTGCTTTCTCATATGAACTGTCGAAGAAAGAGGGGAAAGTTGGGACACCTGAAAGACCCCTTTCAGACCTTGGACTGCTAAGCTACAGAGGATATTGGACAAGGGTTCTCTTGGACATTCTGAAGAAGCACAAGGGGAACATTTCTATCAAGGAACTGAGTGATATGACTGCCATAAAAGCTGAAGATATATTAACGACACTGCAGAGTCTAGAATTGATTCAATACAGGAAAGGTCAACATGTGATATGCGCTGATCCCAAAGTGTTGGATCGCCATCTTAAAGCTGCTGGGAGGGGAGGCTTGGATGTTGATGTTTCCAAATTGATCTGGACTCCTTACAAAGAACAAAGTTAA 1293 0.464 MGSLETPTGSGPSAGNGKSTSVDAAEAPPEPDMSKRRRSSVLPLEVGTRVMCRWRDSKYHPVKVIERRKVSNAIPGDYEYYVHYTEFNRRLDEWVKLDQLDLDSVEAVVDEKVEEKGASGLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDCLRLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLDVDVSKLIWTPYKEQS* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0124 430 MobiDBLite consensus disorder prediction 1 40 - -
Pvu5g0124 430 MobiDBLite consensus disorder prediction 1 20 - -
Pvu5g0124 430 Gene3D - 33 154 - -
Pvu5g0124 430 Pfam RNA binding activity-knot of a chromodomain 44 102 IPR025995 -
Pvu5g0124 430 PANTHER HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 9 430 - -
Pvu5g0124 430 Gene3D - 333 413 IPR036388 -
Pvu5g0124 430 Pfam MYST family zinc finger domain 156 210 IPR040706 -
Pvu5g0124 430 Gene3D - 155 211 - -
Pvu5g0124 430 SMART chromo_7 58 117 IPR000953 -
Pvu5g0124 430 CDD NAT_SF 266 324 - -
Pvu5g0124 430 Pfam MOZ/SAS family 215 392 IPR002717 GO:0004402|GO:0006355|GO:0016573
Pvu5g0124 430 SUPERFAMILY Chromo domain-like 38 155 IPR016197 -
Pvu5g0124 430 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 155 426 IPR016181 -
Pvu5g0124 430 Gene3D - 213 425 - -
Pvu5g0124 430 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 154 425 IPR002717 GO:0004402|GO:0006355|GO:0016573
Pvu5g0124 430 PANTHER HISTONE ACETYLTRANSFERASE 9 430 - -
Pvu5g0124 430 CDD CBD_MOF_like 47 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0124 Pvu-Chr5 980250 986506 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0124 6 430 C2H2 Transcription Factor Family AT5G64610 86.824 0.0 775
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0124 K11308 - gmx:100819168 845.884