Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0121 ATGGCATTCACTCATCCATTCATGCTTGCCATCACCATTTCCAACCTACTACTAATCTTCTTCTCTCAATCTTCCACAGCATTAGACTCCATCACTCAATCTCAGCCACTTCATGATGATGGCAGCACCTTAGTTTCCAATGATGGAACCTTTGAGTTAGGGTTCTTCAGTCCAGGTAGCTCCACAAACCGCTACATAGGGATATGGTACAAAATCATCCCAGTCAAAACCATTGTTTGGGTTGCCAACCGTGACAGTCCAATCAAAGGGAACAGCAGCAACATCAAATCCAACATGTTAACCATCGCCAATGATGGAAACATGGTGCTTCTCGACAGCAACAATCAAACTATTTGGTCAACAAACATCACCTCACTCACAACTCACCCTTTGGTGCAGCTCTTGGACACTGCAAACTTGGTGCTTAAAGAAGGCAACAAGAACAACAGCAATGAAGAGAGTTTTTTGTGGCAAAGCTTTGACCACCCTTGTGATACTCTCTTGCCAGGAATGAAGCTTGGGTGGGACCTTAAAAAGGGTATTGAAAGGAAGCTAAGTGCATGGAAGAGCTGGGATGATCCATCTTCAGGGAACTTAACTTGGGGTATGCTCCTTAGTAGTAACCCTGAATTGGTTCTGAGGAAAGGTTCAGATGAGTATCATAGGAGTGGACCTTGGAATGGAGCAGGGTTCAGTGGCCAACCTGTGTTGAGAATCACTCCAATTGTTGACACCAAATTTGTCAATGATTCAAACCAGGTTTATTACTCATACACGCTTAGGAACAAGTCTGTGATCTCAATAACTTACTTGAACCAAACTCTTGTTCATCGCAAACGCATCACATGGATTCCTGAAAACAAAACTTGGAGGGTTTATGAGTCTGTTCCTAGAGATGAATGTGATCCCTATAACCCATGTGGCCCAAATGGAAATTGCATGGTTAATGAGACACCCATTTGCCAGTGTTTAGAAGGGTTTGAACCCAAATCTCCCCAGAATTGGAACACGTTTGAGTGGACACAAGGATGTGTGCATAGAGAACCTTGGAGTTGTGGGGTGAAAAATGAAGATGGTTTTCGTAGATTTGCTTCAATGAAAGTTCCCGACACGAGAAGTTCTTGGACTTATGGAAATATGGCACTTGAAGATTGTAGGATCAAATGCTTGAAAAACTGTTCTTGCATGGCTTATTCAAACTTGGACATAAGGGAAGGTGGCAGTGGTTGTTCCATTTGGTTTGGTGATCTTATTGATTTGAAATTGGTTCAAGCAAGCCAACAAGATCTATATATTCGAATGGCTATTTCAGGTTCAGATGAAGAAGATACAAGAAAAAAAAAGGCTTTAGTAATTACGATCCCACTTGTGTCTGTCATCACTATTTTGCTACTTGTTGTCTTCTTATATATTTATATGGGAAAAAGAAAGCATAAAGGAAAAGAAAGTGATGCAAAGAACATGGTATCAACTGAAAAGAAAGATGAGGAAGAAAACCAAGATTTTGAGCTTCCTTTCTTTGATCTTGCTTTAATATTTAATGCCACCAATGGCTTCTCTGAAGACAACAAACTTGGAGAAGGTGGTTTTGGACCAGTATATAAGGGTACACTCCAAGATGGAAGAGATGTTGCCATCAAAAGACTCTCAAGGAGTTCAACACAAGGAGTGAAAGAATTCAAGAATGAAGTTATATTGTGTGCAAAACTTCAACATCGAAATCTTGTTAAGGTCCTTGGTTGTTGTGTTCAAGAAGAAGAGAAAATGTTACTATATGAATATATGCCGAACAAAAGCCTAGATTCATTTCTTTTTGATTCAACACAATCTAAACTTCTAGACTGGTCTAAGCGCTTCAACATCATATGTGCAATTGCTCATGGACTTCTTTATCTGCATCAAGATTCTAGACTAAGGATCATACACAGAGATCTAAAAGCAAGTAATATTTTGCTAGATGATGATATGAATCCAAAAATTTCAGATTTTGGTTTAGCAAGACTTTGTGGAGATGATCAAATTGAAGGGAATACAAATAGAGTGGTTGGAACATATGATTATATGGCACCAGAATACGCCATTGATGGTTTATTCTCCATAAAATCTGATGTATTCAGCTTTGGCGTATTATTGTTGGAGATTGTGAGTGGAAAGAAAAATAGAGGAGTTACAAGTACAAGCGATACTTATAATCTCATTGGACATGCATGGAGATTGTGGAAAGATGATGATCCAACAAAATTGATTGATATTTGTTTAGAAGAGTCATGTGTTGTATCTGAAGTCTTACGTTGCATTCAAGTTGGTCTTTTATGTCTACAACTTCATCCAAATGATAGACCAAACATGGCATCTGTGGTTGTTATGTTGACCAATGAAACCATTTTAGCTCAACCAAAGGAGCCTGGTTTTTTTATTGGAAAAGCGATTCCTAGTGAAGTAGAATCTTCTACTGGAAAAGAAATATTTGTTTCAGTTAATGAAATGTCTATTTCACTATTGGATGCTAGATAA 2514 0.3866 MAFTHPFMLAITISNLLLIFFSQSSTALDSITQSQPLHDDGSTLVSNDGTFELGFFSPGSSTNRYIGIWYKIIPVKTIVWVANRDSPIKGNSSNIKSNMLTIANDGNMVLLDSNNQTIWSTNITSLTTHPLVQLLDTANLVLKEGNKNNSNEESFLWQSFDHPCDTLLPGMKLGWDLKKGIERKLSAWKSWDDPSSGNLTWGMLLSSNPELVLRKGSDEYHRSGPWNGAGFSGQPVLRITPIVDTKFVNDSNQVYYSYTLRNKSVISITYLNQTLVHRKRITWIPENKTWRVYESVPRDECDPYNPCGPNGNCMVNETPICQCLEGFEPKSPQNWNTFEWTQGCVHREPWSCGVKNEDGFRRFASMKVPDTRSSWTYGNMALEDCRIKCLKNCSCMAYSNLDIREGGSGCSIWFGDLIDLKLVQASQQDLYIRMAISGSDEEDTRKKKALVITIPLVSVITILLLVVFLYIYMGKRKHKGKESDAKNMVSTEKKDEEENQDFELPFFDLALIFNATNGFSEDNKLGEGGFGPVYKGTLQDGRDVAIKRLSRSSTQGVKEFKNEVILCAKLQHRNLVKVLGCCVQEEEKMLLYEYMPNKSLDSFLFDSTQSKLLDWSKRFNIICAIAHGLLYLHQDSRLRIIHRDLKASNILLDDDMNPKISDFGLARLCGDDQIEGNTNRVVGTYDYMAPEYAIDGLFSIKSDVFSFGVLLLEIVSGKKNRGVTSTSDTYNLIGHAWRLWKDDDPTKLIDICLEESCVVSEVLRCIQVGLLCLQLHPNDRPNMASVVVMLTNETILAQPKEPGFFIGKAIPSEVESSTGKEIFVSVNEMSISLLDAR* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0121 837 Pfam Domain of unknown function (DUF3403) 791 837 IPR021820 GO:0004674
Pvu5g0121 837 Pfam Protein tyrosine and serine/threonine kinase 522 746 IPR001245 GO:0004672|GO:0006468
Pvu5g0121 837 ProSiteProfiles Bulb-type lectin domain profile. 28 155 IPR001480 -
Pvu5g0121 837 Gene3D Hepatocyte Growth Factor 351 433 - -
Pvu5g0121 837 SUPERFAMILY Protein kinase-like (PK-like) 500 805 IPR011009 -
Pvu5g0121 837 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 37 830 - -
Pvu5g0121 837 Pfam D-mannose binding lectin 77 189 IPR001480 -
Pvu5g0121 837 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Pvu5g0121 837 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 194 IPR036426 -
Pvu5g0121 837 Gene3D Phosphorylase Kinase; domain 1 478 594 - -
Pvu5g0121 837 SMART serkin_6 519 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0121 837 SMART ntp_6 355 434 IPR003609 -
Pvu5g0121 837 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 37 830 - -
Pvu5g0121 837 CDD PAN_AP_plant 351 435 - -
Pvu5g0121 837 Gene3D Transferase(Phosphotransferase) domain 1 595 800 - -
Pvu5g0121 837 CDD EGF_CA 299 331 - -
Pvu5g0121 837 SMART blect_4 34 163 IPR001480 -
Pvu5g0121 837 PIRSF SRK 1 837 IPR024171 GO:0004674
Pvu5g0121 837 ProSiteProfiles EGF-like domain profile. 297 333 IPR000742 -
Pvu5g0121 837 Pfam PAN-like domain 352 420 IPR003609 -
Pvu5g0121 837 CDD B_lectin 40 163 IPR001480 -
Pvu5g0121 837 Pfam S-locus glycoprotein domain 222 331 IPR000858 GO:0048544
Pvu5g0121 837 Gene3D - 22 160 IPR036426 -
Pvu5g0121 837 CDD STKc_IRAK 525 792 - -
Pvu5g0121 837 ProSiteProfiles PAN/Apple domain profile. 352 435 IPR003609 -
Pvu5g0121 837 ProSiteProfiles Protein kinase domain profile. 519 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0121 Pvu-Chr5 969056 972712 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0121 464 837 Receptor kinase-like Gene Family AT4G23150 51.187 2.05e-126 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu5g0121 PK_Tyr_Ser-Thr 3.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0121 - - gmx:100790436 1088.56