Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0117 ATGGCCGAAGTCATCAACATGCCTCCCGAATCCCTCGATCAATCTCCCTCTGCTTCAGCTCCTCCTCCTCCCCCTCCGCCACCCACTTCTGCCGCCGAAGAAGATCCTCCTCCGCCGCGCCGCCGGGACCGCCGTGAAGATCGGGAATTAGACCGCCATCCCAACCGTAGCCGCGATTACTACGACCGCGACAGGGACTTCAAGCGCCGCCGCAGCCCTAGCCCCGGCTACCGCGACCGCCGCTACTCTCCCCAGCCGCCATCGCGCCGCTCGCCTCCCTCGTACAAGCGGTCTCGGAGGGGCAGCCCCCGTGGTTATGGACCTGAGGACAGATTTGGCTATGAGTATTTTGGTGGCTATGAACGGGGAGTGGGTGGAAGAACTGGTTATGCAGATGAGAAGTCTTATGGCAGGCTTGCACATCGATCTGTTGGGGGATATCATAATGGGATGTCTGATGTTGATATTAACCGTGGTTATGCAGATTTGTCAAGTGGAGGTGCACAAAGAGAGGGGTTGATGTCCTATAAACAATTCATTCAGGAGCTTGAAGATGACGTACTGCCAGCTGAAGCTGAGCGTAGGTATCAAGAATACAAATCAGAGTATATTTCTACCCAAAAACGTGCTTATTTTAATGCTCATAAGGATGAGGAGTGGTTAAAAGATAAATATCATCCAACAAATTTACTTACAGTAATTGAAAGGAGGAATGAAAATGCTCGACGGCTTGCAAAGGATTTTTTGCTTGATTTGCAGAGTGGAACATTAGACCTAAATCCTGGTTTGAGTTCCTCTTCATCGAGTAAATCAGGGCAAGCCAGTGAACCTAATTCAGAGGAAGAAACAGATGGTGGCATTAAGCGAAGAAGACATGGTAGGGGACCTAATAAAGATAATGATTTCTCAGCTGCACCAAAGGCTCACCCTATCAGCTCTGAGCCTAGACGGATACAAACAGATATTGTAAAAGCTCAGGCTGTTGTTCGTAAGCTCGACACGGAGAAGGGTATTGAAGATAATATTTTATGTACCAGTGACCACAACAGGAGTGATGATAAGTCTCACAGTGGGTCTGTGGGCCCCATAATAATTATCCGAGGCTTAACATCTGTGAAGGGCTTAGAGGGTGTTGAGCTATTGGACACACTTATTACATATCTTTGGCGCATTCATGGTATTGATTACTATGGAATGATTGAGGTTAATGAGGCCAAGGGTTTTAGACATGTGAGACCAGAAGGAGCAGGGCATGAGGAAACAAGTAAATCAGGTTCGGAATGGGAGAAGAAACTTGATCAATTTTGGCAGGGGAGGTTGAATGGTCAGGATCCATTGGAATTGATGAGTGCGAAGGAGAAGATAGATGCTGCTGCAGCTGATGTGTTGGATCCATATGTTAGAAAAATTAGGGATGAGAAATATGGGTGGAAGTATGGTTGTGGAGCTAAGGGCTGCACAAAGCTTTTTCATGCGGCTGAATTTGTATACAAACATTTGAAGCTAAAGCATCCTGAGCTTGTGATGGAACTCACATCAAAATTGCGTGAGGATCTTTATTTTCAAAATTACATGAATGATCCTGATGCTCCTGGTGGAACACCTGTGATGCAGCAACCTCAGAAGGACAGGGGTCTAAAGAGAAGATTAGGAGGTTTGGAAGGGCGATTGAAGGATGATCGTGGTAACAGGAATGAGAAAATGAATGGAGATAGGGATAGGGACAGGGATAGGGGTGATAGATCCCTATCCCCATCCAATGAGGAAGCAATGTATGAAGCATATGGAGTACCTCCATTTACCTCGGATATGCCCCCTCCTCCACCACTTTTGATGCCTGTACCTGGTGCTGGGCCTTTGGGACCCTTTGTCCCTGCTCCACCAGAAGTTGCAATGCAGATGTTAAGGGAGCAAGGAGGAGGAGGTGCATCTTACGATCCCTCAGGAAGGAAGATGCGATCTGGTCCTCATATGGGTGGTGGACCAGGGCCTATTATTGCTGTCCCTCCATCCTTTAGACCAGATCCTCGACAGATGAGAAGCTACGAAGATCTGGATGCCCCAGAAGACGAAGTAACTGTGATAGACTATCGGAGCTTGTAG 2103 0.4774 MAEVINMPPESLDQSPSASAPPPPPPPPTSAAEEDPPPPRRRDRREDRELDRHPNRSRDYYDRDRDFKRRRSPSPGYRDRRYSPQPPSRRSPPSYKRSRRGSPRGYGPEDRFGYEYFGGYERGVGGRTGYADEKSYGRLAHRSVGGYHNGMSDVDINRGYADLSSGGAQREGLMSYKQFIQELEDDVLPAEAERRYQEYKSEYISTQKRAYFNAHKDEEWLKDKYHPTNLLTVIERRNENARRLAKDFLLDLQSGTLDLNPGLSSSSSSKSGQASEPNSEEETDGGIKRRRHGRGPNKDNDFSAAPKAHPISSEPRRIQTDIVKAQAVVRKLDTEKGIEDNILCTSDHNRSDDKSHSGSVGPIIIIRGLTSVKGLEGVELLDTLITYLWRIHGIDYYGMIEVNEAKGFRHVRPEGAGHEETSKSGSEWEKKLDQFWQGRLNGQDPLELMSAKEKIDAAAADVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVYKHLKLKHPELVMELTSKLREDLYFQNYMNDPDAPGGTPVMQQPQKDRGLKRRLGGLEGRLKDDRGNRNEKMNGDRDRDRDRGDRSLSPSNEEAMYEAYGVPPFTSDMPPPPPLLMPVPGAGPLGPFVPAPPEVAMQMLREQGGGGASYDPSGRKMRSGPHMGGGPGPIIAVPPSFRPDPRQMRSYEDLDAPEDEVTVIDYRSL* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0117 700 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 700 IPR039727 GO:0006397
Pvu5g0117 700 ProSitePatterns Zinc finger C2H2 type domain signature. 481 504 IPR013087 -
Pvu5g0117 700 MobiDBLite consensus disorder prediction 1 114 - -
Pvu5g0117 700 Pfam Arsenite-resistance protein 2 420 572 IPR007042 -
Pvu5g0117 700 MobiDBLite consensus disorder prediction 259 280 - -
Pvu5g0117 700 MobiDBLite consensus disorder prediction 281 298 - -
Pvu5g0117 700 MobiDBLite consensus disorder prediction 526 590 - -
Pvu5g0117 700 MobiDBLite consensus disorder prediction 259 319 - -
Pvu5g0117 700 MobiDBLite consensus disorder prediction 15 34 - -
Pvu5g0117 700 MobiDBLite consensus disorder prediction 542 584 - -
Pvu5g0117 700 MobiDBLite consensus disorder prediction 638 686 - -
Pvu5g0117 700 MobiDBLite consensus disorder prediction 35 77 - -
Pvu5g0117 700 Pfam SERRATE/Ars2, N-terminal domain 177 259 IPR021933 -
Pvu5g0117 700 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0117 Pvu-Chr5 939170 948533 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0117 77 700 C2H2 Transcription Factor Family AT2G27100 61.598 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0117 - - gmx:100811300 1042.72