Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0116 GTAATGAGTTATGTTTGGTTTTTTGAACAGGAACTGAGTGATATGACTGCCATAAAAGCTGAAGATATATTAACGACACTGCAGAGTCTAGAATTGATTCAATACAGGAAAGGTCAACATGTGATATGCGCTGATCCCAAAGTGTTGGATCGCCATCTTAAAGCTGCTGGGAGGGGAGGCTTGGATGTTGATGTTTCCAAATTGATCTGGACTCCTTACAAAGAACAAAGTTAA 234 0.3974 VMSYVWFFEQELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKVLDRHLKAAGRGGLDVDVSKLIWTPYKEQS* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0116 77 PANTHER HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 10 77 - -
Pvu5g0116 77 Gene3D - 5 58 IPR036388 -
Pvu5g0116 77 PANTHER HISTONE ACETYLTRANSFERASE 10 77 - -
Pvu5g0116 77 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 73 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0116 Pvu-Chr5 938568 938803 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0116 10 77 C2H2 Transcription Factor Family AT5G64610 95.588 1.33e-41 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0116 K11308 - pvu:PHAVU_005G0107000 158.303