Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu5g0115 | AATAGAAGGCTTGACGAGTGGGTTAAGCTTGATCAGCTTGATCTTGATTCAGTGGAGGCGGTTGTTGATGAGAAAGTGGAGGAGAAGGGTGCGTCTGGCTTGAAGATGACACGCCACCAAAAGAGGAAGATTGATGAGACACATGTAGAGGGACATGAGGAGCTTGATGCTGCTAGTTTGCGAGAACACGAAGAATTTACAAAAGTGAAAAATATAGCTACCATTGAACTTGGAAGATATGAGATTGAGACATGGTACTTCTCCCCATTCCCACCAGAATACAATGACTGTTTGAGGCTGTACTTTTGTGAGTTTTGCCTCAATTTCATGAAGCGCAAAGAACAGCTTCAGAGGCATATGAGGAAATGCGATCTGAAGCATCCCCCTGGTGATGAGATATACAGAAGTGGCACACTGTCAATGTTTGAGGTTGATGGAAAGAAGAACAAGGTTTATGGGCAGAATCTTTGTTATCTGGCGAAGTTATTTCTTGATCACAAGACCCTCTATTATGATGTAGATCTGTTTCTGTTCTATGTTTTGTGTGAATGTGATGATCGAGGTTGTCACATGGTTGGCTATTTCTCCAAGGAAAAACATTCTGAGGAATCTTACAATTTGGCATGTATCCTCACCCTTCCACCTTACCAAAGGAAAGGCTATGGCAAATTTCTAATTGCTTTCT | 685 | 0.419 | NRRLDEWVKLDQLDLDSVEAVVDEKVEEKGASGLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDCLRLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAF | 228 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu5g0115 | 228 | Gene3D | - | 125 | 228 | - | - | |
| Pvu5g0115 | 228 | CDD | NAT_SF | 179 | 228 | - | - | |
| Pvu5g0115 | 228 | Pfam | MYST family zinc finger domain | 69 | 123 | IPR040706 | - | |
| Pvu5g0115 | 228 | PANTHER | HISTONE ACETYLTRANSFERASE | 1 | 228 | - | - | |
| Pvu5g0115 | 228 | Gene3D | - | 68 | 124 | - | - | |
| Pvu5g0115 | 228 | Gene3D | - | 1 | 67 | - | - | |
| Pvu5g0115 | 228 | PANTHER | HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 | 1 | 228 | - | - | |
| Pvu5g0115 | 228 | Pfam | MOZ/SAS family | 128 | 228 | IPR002717 | GO:0004402|GO:0006355|GO:0016573 | |
| Pvu5g0115 | 228 | SUPERFAMILY | Chromo domain-like | 1 | 68 | IPR016197 | - | |
| Pvu5g0115 | 228 | ProSiteProfiles | MYST-type histone acetyltransferase (HAT) domain profile. | 67 | 228 | IPR002717 | GO:0004402|GO:0006355|GO:0016573 | |
| Pvu5g0115 | 228 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 70 | 228 | IPR016181 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu5g0115 | Pvu-Chr5 | 934466 | 938406 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pvu5g0115 | 1 | 228 | C2H2 Transcription Factor Family | AT5G64610 | 91.667 | 5.25e-159 | 446 |