Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0114 ATGGGTTCCATCGAAATGCCAAACGGCAACGGAAAATCTCCGTCCTTCGACAGCGCGGAGGCGCCACCGGAGTCCAACACGTCGAAGCGGCGGAGATCGTCGGTGCTCCCCCTGGAGGTCGGCACGCGCGTCATGTGCCGGTGGAGGGACAGCAAGTACCATCCCGTGAAGGTCATCGAACGCCGGAAGGTTCCCGGCGCCGATTACGAGTATTACGTCCATTACACCGAGT 232 0.6121 MGSIEMPNGNGKSPSFDSAEAPPESNTSKRRRSSVLPLEVGTRVMCRWRDSKYHPVKVIERRKVPGADYEYYVHYTE 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0114 77 Gene3D - 26 77 - -
Pvu5g0114 77 SUPERFAMILY Chromo domain-like 34 76 IPR016197 -
Pvu5g0114 77 MobiDBLite consensus disorder prediction 1 36 - -
Pvu5g0114 77 PANTHER HISTONE ACETYLTRANSFERASE 14 77 - -
Pvu5g0114 77 MobiDBLite consensus disorder prediction 1 33 - -
Pvu5g0114 77 Pfam RNA binding activity-knot of a chromodomain 38 77 IPR025995 -
Pvu5g0114 77 PANTHER HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 14 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0114 Pvu-Chr5 933593 933893 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0114 19 77 C2H2 Transcription Factor Family AT5G64610 70.968 2.46e-23 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0114 K11308 - pvu:PHAVU_005G0107001 164.081