Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0095 GGAAATGTGATCCCTCTTTCACAAGTGCGTAATGATGTAGCAACTGCATTCAGAAAGGAAGTGGAGTGGGAAAAAAACCAAATGATGCTACCTTTCAAGAGATTGTGTGAGCAAAGAAAGGTGCATGTGGATGTTGTAGTGATTGAATCAGATGATGTGGCTATTGCAGTAGCAGAGGAAGTGGCTAAGGGTGCTATAACCAAACTTGTTGTTGGAGCTTCATCTAGTGGCATATTTAAAAGTAAACAGAAGGGTATGTCTATGAAAATATCAGTAAGCACTCCAAGATTTTGCACAGTTTATGCTATTTCGAAGGGAAAATTGTCCATACGACAGTCCGACATGCCGATTGATGTAAGCATCATGGATGATGCTAGTGAAACCAGTTTTTCTTCCAGCAGCTCATCTAACTACACTTCCACCTCTCAGACAGAATCTACCTCAGTTTCATCATATGCTGGTTTACACTCGTCTTCCCTAGCAACACAACGATTTCAAGCTCTTTCAAGTATAAATAGTGTCCTTCTAAGCACAAATCCAAGTTTATCTGACACTAGCCATTCTAGGGGCCAATCTCTAGATCTTGGGAGAGAAAACACTGCTACCAGCTCTGCAAGAAACTCAGACATTGATCATGCCTTAAGCCGAGTCTCTAGTTGCAAAAGCTTTATTTCAGATACTGAATCTTGGATGTATGATCAAAATTCTATCAAGGATGTAGCACTAGCAACTACATTTCCATCACCTAATATGCAGGCAAAATTTAACCTTGAGCTGGAAAAGTTGAGAATTGAACTAAGACATGCCCAAGGACTGCATGCAGTAGCTCAAAGTGAGAAAACTGAAGCATGCCGGAAGCTGAATGACCTTAGCAAGAGACGGTCAGAAGAAACCATGAAAATGAAGGAGATTGTTGCTAAGGAGGAGAAGGCAGAGGAATTAGCAAAACTAGAAAGTGAGAAATATCAGGATGCATCCAGAGAAGCTGTATATTTGAAAGAATGTGCTGAAAGAGAGGCTGCAGAAAGGAAAGAAACAGAGTTGAGAGTCATCCGTGCTACAAAAGAGAAAGAAAAATTGGTGGATGCTCTAAGTGGTACAATGTTGCAGTACCGGAAGTTTACATGGGATGAAATAGTCTCAGCTACTTCATCTTTTTCTGAAGATCTGAGAATTGGAATGGGAGCATATGGAACAGTGTACAAGTGCAATTTGTATCACACAACTGTTGCTGTTAAAGTTCTCAACACTAATGGAAATCGTGAAAGCAAGCAATTCCAACAGGAGTTAGAGATATTGAGCAGAATTCGTCATCCAAACTTGCTTCTTCTTCTTGGTGCATGTCATGATCATGGATGTCTTGTATATGAATATATGGAGAATGGTAACCTGGAAGACAGACTGCTGAGGAAAAACAACACTTCCCCAATCACATGGTTTGATAGATTTCGAATAGCTTGGGAAATTGCATCGGCTCTCGCCTTCCTTCACAGCTCAAACCCAGAACCTATTATTCATCGTGACTTAAAACCAGCAAACATCTTGCTTGGTCGTAACCTTGTCAGCAAGATTGGTGACATTGGACTTTCTACAGTACTCCATTCTGATAATTTATCTACCATGTTCAAGGACACAGCACCTGTTGGAACACTCTGCTACATTGATCCTGAGTACCAAAGGACAGGGTTAATATCTCCAAAGTCTGATGTTTATGCTTTTGGAATGGTGATCTTACAGTTATTGACAGCAAAACCAGCTATAGCACTAGCTCATAAAGTTGAAATTGCAATTGAAGGTGGGAATTTGACAGATATATTGGATCCAGAGGCAGGGGCTTGGCCGTTTAAAGAGACACTAGATTTGGCCGTGTTAGGATTGAGCTGTGCAGAACTTCGGCGTAGAGACCGGCCTGATTTAAAAGATCAAGTGCTTCCAACACTTGAGAGATTGAAAGAAGTTGCTGATAGGGCCCAACATTCTGCTTCAACTGTTACTATTAAATCCAAACCTCCTAATCACTTTATCTGTCCAATTCTTCAGGATGTGATGGATGATCCTTGTGTTGCTGCTGATGGATATACATATGATCGCAAAGCAATTGAAAAGTGGCTTCAAGAGAATGACAATTCACCAATGACAAACATGGCCTTACCTCACAAGCATTTAATTCCTAATTACACACTTTTGTCAGCAATTTTGGAGTGGAAGTCCAGAGAATCATGA 2223 0.4067 GNVIPLSQVRNDVATAFRKEVEWEKNQMMLPFKRLCEQRKVHVDVVVIESDDVAIAVAEEVAKGAITKLVVGASSSGIFKSKQKGMSMKISVSTPRFCTVYAISKGKLSIRQSDMPIDVSIMDDASETSFSSSSSSNYTSTSQTESTSVSSYAGLHSSSLATQRFQALSSINSVLLSTNPSLSDTSHSRGQSLDLGRENTATSSARNSDIDHALSRVSSCKSFISDTESWMYDQNSIKDVALATTFPSPNMQAKFNLELEKLRIELRHAQGLHAVAQSEKTEACRKLNDLSKRRSEETMKMKEIVAKEEKAEELAKLESEKYQDASREAVYLKECAEREAAERKETELRVIRATKEKEKLVDALSGTMLQYRKFTWDEIVSATSSFSEDLRIGMGAYGTVYKCNLYHTTVAVKVLNTNGNRESKQFQQELEILSRIRHPNLLLLLGACHDHGCLVYEYMENGNLEDRLLRKNNTSPITWFDRFRIAWEIASALAFLHSSNPEPIIHRDLKPANILLGRNLVSKIGDIGLSTVLHSDNLSTMFKDTAPVGTLCYIDPEYQRTGLISPKSDVYAFGMVILQLLTAKPAIALAHKVEIAIEGGNLTDILDPEAGAWPFKETLDLAVLGLSCAELRRRDRPDLKDQVLPTLERLKEVADRAQHSASTVTIKSKPPNHFICPILQDVMDDPCVAADGYTYDRKAIEKWLQENDNSPMTNMALPHKHLIPNYTLLSAILEWKSRES* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0095 740 PANTHER OS02G0152300 PROTEIN 1 736 - -
Pvu5g0095 740 ProSitePatterns Serine/Threonine protein kinases active-site signature. 504 516 IPR008271 GO:0004672|GO:0006468
Pvu5g0095 740 SMART Ubox_2 673 735 IPR003613 GO:0004842|GO:0016567
Pvu5g0095 740 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 1 736 - -
Pvu5g0095 740 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 670 740 IPR013083 -
Pvu5g0095 740 Pfam U-box domain 671 738 IPR003613 GO:0004842|GO:0016567
Pvu5g0095 740 CDD STK_N 4 106 - -
Pvu5g0095 740 Coils Coil 259 279 - -
Pvu5g0095 740 MobiDBLite consensus disorder prediction 180 207 - -
Pvu5g0095 740 ProSitePatterns Protein kinases ATP-binding region signature. 392 413 IPR017441 GO:0005524
Pvu5g0095 740 CDD RING-Ubox_WDSUB1_like 674 714 - -
Pvu5g0095 740 SMART serkin_6 386 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0095 740 SUPERFAMILY RING/U-box 668 738 - -
Pvu5g0095 740 ProSiteProfiles Protein kinase domain profile. 386 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0095 740 Coils Coil 308 328 - -
Pvu5g0095 740 Pfam Protein kinase domain 389 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0095 740 Gene3D Phosphorylase Kinase; domain 1 354 458 - -
Pvu5g0095 740 ProSiteProfiles U-box domain profile. 669 740 IPR003613 GO:0004842|GO:0016567
Pvu5g0095 740 SUPERFAMILY Protein kinase-like (PK-like) 368 640 IPR011009 -
Pvu5g0095 740 Gene3D Transferase(Phosphotransferase) domain 1 459 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0095 Pvu-Chr5 769561 775585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0095 1 737 U-box Gene Family AT4G25160 52.129 0.0 757
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pvu5g0095 Pkinase 1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0095 - - gsj:114409387 1220.68