Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0080 ATGGCTTCCTTCCAACTTCTCACAATTGTTGCATTCATTTTTCTTGCCAAACCCTGCATCAGTTCATCATCCTGTGAAAATTCTACCATCCCCACCAATTATGCAAACAAAAGCACCACATCCACTTCCACACAAACCTTCAAAAACTACATCAAAACCTCTTGCAACTCAACCACATATCCATCAATATGCTACAGCACTTTATCCCCCTATGCCACAAAAATTGAAGCAGATCCTCTGAAACTATGCAGTGTGTCTCTCTCCCTAGCCTACAAGGCAGCAAAGAGTGCATCCTCCACCATATCAAAGATTCTGAAGAAGAACAACATGACAGGGATTGCTGAAGAAGTGGTGGAAGATTGCTTAAGCAATGTGAAGGACTCCATTGGTGAGCTCAAAGATTCTCTTGATTCATTGGGTGATTTGGATGGTAGTGACAGAAAGTTTGAGATCAGCAACATAAAGACATGGGTGAGTGCTTCCATCACCAATGACCAAACTTGCTCAGATGGGTTTGATGAGATGAATGTGGATTCATCTTTGACAGAAGAAATCAGAAAGGTTGTTTTGGATGTGGCAAGGAAGACTAGCAATGCTTTGTATTTCATCAACAACAATGTGCACTGA 627 0.4147 MASFQLLTIVAFIFLAKPCISSSSCENSTIPTNYANKSTTSTSTQTFKNYIKTSCNSTTYPSICYSTLSPYATKIEADPLKLCSVSLSLAYKAAKSASSTISKILKKNNMTGIAEEVVEDCLSNVKDSIGELKDSLDSLGDLDGSDRKFEISNIKTWVSASITNDQTCSDGFDEMNVDSSLTEEIRKVVLDVARKTSNALYFINNNVH* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0080 208 PANTHER PECTINESTERASE INHIBITOR 4 8 206 - -
Pvu5g0080 208 SMART PMEI_2 46 202 IPR006501 GO:0004857
Pvu5g0080 208 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 48 205 IPR035513 -
Pvu5g0080 208 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 206 - -
Pvu5g0080 208 TIGRFAM PME_inhib: pectinesterase inhibitor domain 39 205 IPR006501 GO:0004857
Pvu5g0080 208 Pfam Plant invertase/pectin methylesterase inhibitor 50 200 IPR006501 GO:0004857
Pvu5g0080 208 CDD PMEI-like_3 53 205 - -
Pvu5g0080 208 Gene3D Invertase/pectin methylesterase inhibitor family protein 45 206 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0080 Pvu-Chr5 648879 649505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0080 51 205 Carbohydrate Esterase AT1G53830 29.747 5.08e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0080 - - gmx:100527443 283.493