Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0079 ATGGCAAACTCTGGGATTCTCCTTCTGCTTCTCCTCTGCACCCTCCAGTGCGCCCTCACTCTCTCCAACCCCACCAACTTCATCAAGTCCTCCTGCAGCGCCACCCAGTACCCCGCCCTCTGCGTGGAGTCGCTCTCCGTCTACGCCGCCGCCATCCAGCAGGACCCCCACCAGCTGGTCCAGACCGCCCTCTCCCTCGCCCTCAACAAAACCGAGTCCACCAAAACCTTCGTGGCCAAGTGCAACAAGTTCAAGGGCCTGAAGCCGCGAGAATACGCCGCCCTAAAAGACTGCGTGGAGGAGATCAGCGACGGCGTGGACCGCCTCTCGCGCTCCCTGAAGGAGCTGAAGCTCTGCAAGCTGAAGGGCCAGGACTTCGACTGGCACATGAGCAACGTGGAGACGTGGGTCAGCTCTGCGCTCACCGACGAGAGCACGTGCGGCGACGGGTTCGCCGGAAAGGCGCTGAGCGGGAAGATCAAGGACGCCATCAGGGGCAGAATGGTGAATGTGGCTCAGGTCACCAGCAATGCCCTCTCTCTCATCAACCAGTATGCTGCCAAACACTAG 570 0.6123 MANSGILLLLLLCTLQCALTLSNPTNFIKSSCSATQYPALCVESLSVYAAAIQQDPHQLVQTALSLALNKTESTKTFVAKCNKFKGLKPREYAALKDCVEEISDGVDRLSRSLKELKLCKLKGQDFDWHMSNVETWVSSALTDESTCGDGFAGKALSGKIKDAIRGRMVNVAQVTSNALSLINQYAAKH* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0079 189 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 189 - -
Pvu5g0079 189 CDD PMEI-like_3 30 187 - -
Pvu5g0079 189 SMART PMEI_2 23 181 IPR006501 GO:0004857
Pvu5g0079 189 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 26 185 IPR035513 -
Pvu5g0079 189 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 7 189 - -
Pvu5g0079 189 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 185 IPR006501 GO:0004857
Pvu5g0079 189 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 185 IPR035513 -
Pvu5g0079 189 Pfam Plant invertase/pectin methylesterase inhibitor 26 181 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0079 Pvu-Chr5 620138 621150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0079 28 182 Carbohydrate Esterase AT3G14310 31.410 4.21e-21 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0079 - - gmx:100305900 312.768