Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0061 ATGGCTGGGATTGATGATAATGTTGCCCTCACTGGCGATTGGGGTCTTGCTAGCCCAAGTCCAAGAACATTTTTCTCTAGAATGTTGGAGGAAGATCATGTAACAAGATCAGTCTCAGAACATTCTGGAAGTGGTAGAACTGGGGAATTCTTTTCAGGACCTCATGAGCCTAGTGAGACAGGGAAGAAAAACATGCAGGATGGAGCAGAAGATGGTGATTCTGGACCCCAAAAGTTGAACTCCAGGGGTGGTCTTGTGGAAAGAATGGCTGCTAGAGCTGGGTTCAATGCTCCTAGGTTGAACACTGAAAGCATGAGAACTACTGACCTTTCACTCAATTCTGACATTCACTCTCCTTACTTGACCATCCCACCAGGTCTCAGTCCTACTACACTTTTGGATTCTCCAGTCTTCCTTGCAAATTCACTGGCACAGCCATCTCCAACAACTGGAAAGTTTCTGTTTATGTCAAATGGCAACATGCGGCACTCAGAATTATCATCTGATGCTCCAGAAAAATGCAAGGATAATGGCTTTGATGATATCTATGCATCATCCTTTGCCTTCAAGCCAGCAACAGACTCAGGCTCCTCTTTCTATCATGGTGCTGGAAGAAAAATAAATCCAACTACAGTTCCTCAACAATCACGTCATGGTATCGAGGTTTCGGCTCAGTCAGAAAATTCCTTTCATTCTCAAAGTGTTGATGCTGTTAAAGTTCAAACTGAGAACAGAAGTGGTCTTCATCTTCAGGCAGACTTTGTTGAATCACCTCCCGAAAAAGATATTAAAATGTTTGCAGCTGATCAAAGGGCTTTTGATGCTGTTGGTGGTGGCATTGAACATTCTACTCCAGTTGAAGAGCATGGAGATGAAGAAGGAGATCAAAGAGGCAATGGAGATTCAGTGACTGGTGGTGTTGGGGGCACACCATCTGATGATGGATATAACTGGAGAAAATATGGCCAAAAGCAAGTGAAAGGCAGCGAGTACCCTCGAAGTTACTACAAGTGCACGCATCCAAACTGTCAGGTTAAGAAGAAAGTAGAACGATCTCATGAGGGCCATATAACCGAGATCATCTACAAGGGAACACACAGCCATCCGAAACCTCCTCCAAATCGTCGGTCAGGTATAGGTTCGGTCAACCCTCACACTGAAATGCAAGTGGACAACCCTGAACATGTTGAATCACACAATGGTGGTGAGGGCGACATGGATTGGGGTAATGTACAAAAGGGAAATGTTGCTGGAGCTGGTAACTGGAAGCACGAAAACCTTGAAGCAACATCATCGGCATCTATCGGACCCGAGTACTGCAACCAGTCCACCAATTTGCAGAGTCAAAATGCTGGTACTCTCATTGATTCAGGAGAGGCAGTTGATGCCTCGTCTACTTTTTCTAACGAAGAAGAAGAAGACGACCGAGGCACACATGGTAGTGTATCATTAGGTTATGATGGGGAAGGAGATGAATCAGAATCTAAGAGAAGGAAACTGGAATCATATGCAGACCTGAGTGGAGCTACTAGAGCCATCCGTGAGCCTAGAGTTGTTGTACAGACTACCAGTGAAGTAGATATCCTCGATGACGGTTATCGGTGGCGGAAGTATGGACAAAAAGTTGTCAAAGGAAATCCCAACCCAAGGAGTTACTACAAGTGCACAAATGCAGGCTGCACAGTAAGGAAACATGTGGAGAGAGCTTCACATGACCTTAAATCCGTGATCACTACTTATGAGGGAAAGCACAACCATGATGTTCCTGCTGCTCGTGCCAGCAGCCATGTCAATGCCAACACTTCCAGTGCTGGCCAAGCTTCTGGTGTTCTTCACACCCATGTTCACAGACCTGAATCATCTCAAGTACACAATGGCATGGGAAGGCTCGAGAGGCCGTCCCTTGGCTCGTTCAACCTACCCGGAAGGCAGCAGCTAGGACATTCCCATGGCTTCTCCTTCGGCATGAACCAATCCATGCTTTCGGATCTGGCGATGTCAGGGTTAGGCCACATGCAAGCCAAGCTCCCTGTTATGCCTGTTCATCCATTCTTGGCACAACAACAGCAGCAGCAGCAACAGCAAAATCCTTCAAACGATTTTGGTTTCATGATGCCAAAGGGAGAGCCAAATGTGGAGGGTGGTGGTGGCCTTAACCTGCCAAATGGTTCATCAGTGTACCAAGAAATCATGAGTCGCATGCCCCTTGGACCTCACATGTAA 2223 0.4638 MAGIDDNVALTGDWGLASPSPRTFFSRMLEEDHVTRSVSEHSGSGRTGEFFSGPHEPSETGKKNMQDGAEDGDSGPQKLNSRGGLVERMAARAGFNAPRLNTESMRTTDLSLNSDIHSPYLTIPPGLSPTTLLDSPVFLANSLAQPSPTTGKFLFMSNGNMRHSELSSDAPEKCKDNGFDDIYASSFAFKPATDSGSSFYHGAGRKINPTTVPQQSRHGIEVSAQSENSFHSQSVDAVKVQTENRSGLHLQADFVESPPEKDIKMFAADQRAFDAVGGGIEHSTPVEEHGDEEGDQRGNGDSVTGGVGGTPSDDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGTHSHPKPPPNRRSGIGSVNPHTEMQVDNPEHVESHNGGEGDMDWGNVQKGNVAGAGNWKHENLEATSSASIGPEYCNQSTNLQSQNAGTLIDSGEAVDASSTFSNEEEEDDRGTHGSVSLGYDGEGDESESKRRKLESYADLSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARASSHVNANTSSAGQASGVLHTHVHRPESSQVHNGMGRLERPSLGSFNLPGRQQLGHSHGFSFGMNQSMLSDLAMSGLGHMQAKLPVMPVHPFLAQQQQQQQQQNPSNDFGFMMPKGEPNVEGGGGLNLPNGSSVYQEIMSRMPLGPHM* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0061 740 MobiDBLite consensus disorder prediction 278 319 - -
Pvu5g0061 740 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 96 661 IPR044810 GO:0003700
Pvu5g0061 740 Pfam WRKY DNA -binding domain 313 369 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu5g0061 740 Pfam WRKY DNA -binding domain 530 586 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu5g0061 740 MobiDBLite consensus disorder prediction 686 701 - -
Pvu5g0061 740 MobiDBLite consensus disorder prediction 460 500 - -
Pvu5g0061 740 MobiDBLite consensus disorder prediction 284 298 - -
Pvu5g0061 740 Gene3D WRKY domain 516 582 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu5g0061 740 SUPERFAMILY WRKY DNA-binding domain 521 589 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu5g0061 740 MobiDBLite consensus disorder prediction 616 639 - -
Pvu5g0061 740 SUPERFAMILY WRKY DNA-binding domain 310 371 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu5g0061 740 Gene3D WRKY domain 303 372 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu5g0061 740 SMART WRKY_cls 312 370 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu5g0061 740 SMART WRKY_cls 529 588 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu5g0061 740 MobiDBLite consensus disorder prediction 32 81 - -
Pvu5g0061 740 MobiDBLite consensus disorder prediction 686 719 - -
Pvu5g0061 740 MobiDBLite consensus disorder prediction 363 388 - -
Pvu5g0061 740 ProSiteProfiles WRKY domain profile. 313 371 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu5g0061 740 ProSiteProfiles WRKY domain profile. 524 589 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu5g0061 740 PANTHER WRKY TRANSCRIPTION FACTOR 2-RELATED 96 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0061 Pvu-Chr5 452542 457216 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0061 1 735 WRKY Transcription Factor Family AT5G56270 49.285 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu5g0061 WRKY 3.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0061 K18835 - gmx:100127395 1244.18