Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0034 ATGGATACCTCTGGTAGTACATGTGAGATAGTGGAATCAAGGGAAGAAATAATTTCTATGGTTGACAAACCTGAGAGTAGTTGTGCTCACAAATCAGGAAAAAAGTATTCGATTGAGGATGATATTAATCAGCTTTTTCAGGCTATTGATATTAAAAGTTCAAGAGGTCATAGTTCATCACGGTTACAAAAGAATGCTCTTAAAAGGCCAATAAAAGTCACTTCATCTCAGGCATCAGGAATTGGCATCTCAGAGCCGGTAAGTTTAAAGCAGGCACTTAGAGGGTTGTGCATCTCTCAGGCCTCAGAAATGGCTGCTTTGAAAAGATTGTCTAAGCCATGCAGTTCATCTAGAGTATCAGAGGCTGGCACCATCAAAAGGTTGTACACAGCGGTGGTAGACGAGGGGAAAGGGAATTTGGTTGAAATTTCCCTAGTGCCAGAGATATCTACTGCACCTTCTAATAAATTACCCGGTGTAACTATATCAAGTTCGATTGATCATCGTCCTAGTCCTTTGGTTGATGCTACAAAACCAAAAGAAATGATGATTGGGTTTTCATCCCAAGATCAGATTGTTCCTCTGCCATTAGAGGTTGAGGGTGACAAACCAATAATGGACATTGGAAAACCAGTACTTGCACATTTGTCACCAGTTGCCTCTGCTAGTGAAGTGGTGCCAGAGGATAGAAGGGATCCTGTTTCCTTAAGCAAAGCTTCTCTTAGTTCTTCAATGCCAGTTAAGGGGAAGGAAGCAAATTTACTTCCTGCATCTTGTCCACCTAGCTCTGGCACTGGTAATGGAGGGGATAAATCCACAAGCAGCAATACATGTTTGTCAAAGCCAATATTCAATAACTTGAACTTTCTTAAGAAAAAGGTAAAGCAGGATTTAAGTTCTATCTCAAGCTGCTCCACTCCATGTACAAGTAATGTGGACAAGGAGGTTGGAAATTCTGATTTGAAGCATGGAGTGAAAGAAAATGGGAAATTGTCTCCAAGCAGTTCAAATCATAGCATTGAAGTTAACTCAGTTAATGTTGGTACGGATTCAAGCAAACCTGGTTTCAGCTTGAACTGCAATAAGAGAACTAAGTTTCTGGTGACAAAAGTTGATGAGAAATCAAGATCAAAGGAAAAGGGCGAGTTCTCTCAAAGTTCAAAAAGTAGCATTGGTGAGTATAGTAGTAGCACAAGCATCAGTGAGGAAAGCAGTCTTAGTGGTTCCAGCCGTGGTGGCCACAGACCTCACATGTCGAAACACATGAGATGGGAAGCTATCCGTGCTGTTCAGCAGCAACATGGTAATTTAAATTTGAAGCACTTTAAGTTGCAAAAGAGACTTGGTAGTGGGGACATTGGAACTGTTTACCTTGCGGAACTAATTGGTACAAGCTGCCTTTTTGCACTCAAAGTGATGGACAATGAATTTTTGTCAAGTCGGAAGAAAATGTTCAGGGCCCAAACTGAAAGAGAGATCCTTCAGATGCTAGATCATCCATTTCTTCCTACGCTGTATTCTCATATTGGAACAGATAAGCTCTCTTGCTTGGTTATGGAGTATTGTCCCGGAGGAGATCTGCATGTGCTGCGACAGAGGCAGTCATACAAGAGTTTCTCGGAACAAGCAACTAGGTTTTATGTTGCTGAGGTTCTTCTCGCCCTGGAGTATTTGCACATGCTGGGAGTTGTATATCGAGATCTAAAGCCGGAAAATATCCTAGTACGAGAAGATGGACATATTATGCTGACAGATTTTGATTTGTCACTCAGGTGTTCTGTCAATCCAATGTTAGTCAAGTCATCTTCACCTAACACAGATGCCGCGAAGAAGACCTCCAGTCCCTGTTCTGAAGCTAGCTGCATACACCCTTTCTGTCTCCAACCAGATTGGCAAGTTTCCTGCTTTACTCCCATTCTATTATCTGCTGGAGCAAAATCCCGAAAGATGAAGTCTGACATAGCTTCTCAGGTTGGTCCACTGCCACAGCTTGTGGTGGAGCCTACCAGTGCGCGGTCTAACTCGTTTGTTGGAACCTATGAATATCTTGCACCGGAGATCATCAAGGGTGAGGGTCATGGGAGTGCAGTAGATTGGTGGACTTTTGGTATACTTTTGTTTGAGCTTTTATATGGTAAGACTCCCTTCAAGGGCCAATCAAATGAGGACACATTAGCCAATGTTGTGTCACAATGCCTTAAGTTCCCGGGTGCTCCAATAGTCAGTTTTCATGCCAGAGATTTGATCAGAGGGTTGTTGATAAAGGATCCTGAAAATCGATTAGGTTCTGTAAAAGGTGCTGCTGAAATAAAGCAGCACCCCTTCTTTGAAGGCCTCAACTGGGCTCTAATACGGTGTGCAGCACCACCAGAGCTCCCCAAGTTTCGGGATTTTGGAAGTAGTGCTCCATCTATGGCTGCAAATAAGGAGAATGCAAATGATTTAGAGGATATAGAAGACTGTGAAGAGTTTGAGCTGTTTTAG 2484 0.4263 MDTSGSTCEIVESREEIISMVDKPESSCAHKSGKKYSIEDDINQLFQAIDIKSSRGHSSSRLQKNALKRPIKVTSSQASGIGISEPVSLKQALRGLCISQASEMAALKRLSKPCSSSRVSEAGTIKRLYTAVVDEGKGNLVEISLVPEISTAPSNKLPGVTISSSIDHRPSPLVDATKPKEMMIGFSSQDQIVPLPLEVEGDKPIMDIGKPVLAHLSPVASASEVVPEDRRDPVSLSKASLSSSMPVKGKEANLLPASCPPSSGTGNGGDKSTSSNTCLSKPIFNNLNFLKKKVKQDLSSISSCSTPCTSNVDKEVGNSDLKHGVKENGKLSPSSSNHSIEVNSVNVGTDSSKPGFSLNCNKRTKFLVTKVDEKSRSKEKGEFSQSSKSSIGEYSSSTSISEESSLSGSSRGGHRPHMSKHMRWEAIRAVQQQHGNLNLKHFKLQKRLGSGDIGTVYLAELIGTSCLFALKVMDNEFLSSRKKMFRAQTEREILQMLDHPFLPTLYSHIGTDKLSCLVMEYCPGGDLHVLRQRQSYKSFSEQATRFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVNPMLVKSSSPNTDAAKKTSSPCSEASCIHPFCLQPDWQVSCFTPILLSAGAKSRKMKSDIASQVGPLPQLVVEPTSARSNSFVGTYEYLAPEIIKGEGHGSAVDWWTFGILLFELLYGKTPFKGQSNEDTLANVVSQCLKFPGAPIVSFHARDLIRGLLIKDPENRLGSVKGAAEIKQHPFFEGLNWALIRCAAPPELPKFRDFGSSAPSMAANKENANDLEDIEDCEEFELF* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0034 827 Gene3D Phosphorylase Kinase; domain 1 440 521 - -
Pvu5g0034 827 MobiDBLite consensus disorder prediction 329 354 - -
Pvu5g0034 827 MobiDBLite consensus disorder prediction 221 275 - -
Pvu5g0034 827 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL1 ISOFORM X1 1 826 - -
Pvu5g0034 827 MobiDBLite consensus disorder prediction 377 420 - -
Pvu5g0034 827 ProSiteProfiles Protein kinase domain profile. 442 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0034 827 Gene3D Transferase(Phosphotransferase) domain 1 670 794 - -
Pvu5g0034 827 PANTHER FLIPPASE KINASE 1-RELATED 1 826 - -
Pvu5g0034 827 MobiDBLite consensus disorder prediction 302 354 - -
Pvu5g0034 827 Gene3D Transferase(Phosphotransferase) domain 1 522 591 - -
Pvu5g0034 827 Pfam Protein kinase domain 673 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0034 827 Pfam Protein kinase domain 443 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0034 827 MobiDBLite consensus disorder prediction 384 412 - -
Pvu5g0034 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 563 575 IPR008271 GO:0004672|GO:0006468
Pvu5g0034 827 SMART serkin_6 442 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g0034 827 SUPERFAMILY Protein kinase-like (PK-like) 416 795 IPR011009 -
Pvu5g0034 827 CDD STKc_phototropin_like 440 799 - -
Pvu5g0034 827 MobiDBLite consensus disorder prediction 258 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0034 Pvu-Chr5 239064 243872 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g0034 367 827 AGC Kinase Gene Family AT3G52890 66.314 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pvu5g0034 Pkinase 7.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0034 - - gmx:100784955 1410.97