Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g0030 ATGGAATCTCAATTAGTAGACAGAAATGATGCCATGGAAGTTTCTGGGGATGTGGATTTAAGTACATATGAAGTTCAGGTAGAGCAAGAAACATATAAAGTGGATCCAAATGAGGGGTGTAGAGTACTAGAGAGTTCTTCTGGGGGAGAGTTGGGTATCTGTGATGATGATCATGCTATTCAGGAACCATATGAAGGCTTGGAGTTTGAATCTGAAGATGCTGCTAAGATATTCTATGATGAATATGCCCGACGTGTAGGATTTGTAATGCGTGTGATGTCATGTAGACGGTCAGAAAGGGATGGTAGGATTCTCGCCCGCCGGCTTGGGTGCAATAAAGAGGGTTACTGCGTCAGCATCCGAGGGAAATTTTCATCGGTTCGTAAACCTAGGGCCAGCACAAGGGAAGGGTGTAAGGCAATGATTCACATCAAATATGAGAAATCTGGAAAATGGGTGATAACAAAGTTTGTGAAGGATCATAATCATCCATTAGTAGTCTCTCCACGCGAAGCACGCCAAACAATGGATGAGAAGGATAAGAAAATTCAGGAATTAACAGCAGAACTTCGGCATAAAAAACGGTTGTGTGCAACATATCAAGAACAGCTGACTTCCTTTATGAAGGTTGTTGAAGAGCACAATGAGAAGCTATCTACGAAAATTCATCATGTAGTTAATAATCTCAAAGAATTTGAATCCATAGACGAGCTTTTGCACCAAACATAG 729 0.4129 MESQLVDRNDAMEVSGDVDLSTYEVQVEQETYKVDPNEGCRVLESSSGGELGICDDDHAIQEPYEGLEFESEDAAKIFYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIRGKFSSVRKPRASTREGCKAMIHIKYEKSGKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQELTAELRHKKRLCATYQEQLTSFMKVVEEHNEKLSTKIHHVVNNLKEFESIDELLHQT* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g0030 242 Coils Coil 176 203 - -
Pvu5g0030 242 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 29 241 - -
Pvu5g0030 242 Pfam FAR1 DNA-binding domain 78 166 IPR004330 -
Pvu5g0030 242 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 29 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g0030 Pvu-Chr5 215877 219729 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pvu5g0030 FAR1 4.1e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g0030 - - pvu:PHAVU_005G002900g 491.115