Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu5g0018 | ATGGAGGCTGCTCCTCCTTCCAACGATCTGTGTTCAGTGTGTCATGGCAACTTTCACCTTCCCTGCCAAGCCAATTGCTCTCACTGGTTTTGTGCAAATTGCATCATGCTGGTGTGGCAGCACGGATCAGGGACAAGCTCTTGCAAATGCCCTCTTTGTCGGCGACCCATCACTCTCTTAGTCCCCACCGAACACTCTCTCAGGCAGCGTCACGACCCTGAAGTTGCTCAGATTCTCTCCAAAATTCATGCTTACAACCGTGTCTTCGGTGGCCAACCCTCCTCTTTTTTTCAGAGACTGCAAGATCTTCCTTTTCTGCTGCACAGGCTCTTGCGGGAGTTCCTCGACCCTCACAGATCCCTTCCTCTTGTCGTCCGTGCCCGTGTCTTTATTGCTATGATAGCAAGTTTTCTATACATCCTCAGCCCAATTGACTTCATTCCTGAAGGAGTATTAGGAATAGTTGGTCTCTTAGATGATGTCTTAATTGGGCTCATCTGCTTCCTACATGTTGCTGCCCTTTATAGATCAGTTCTCTACCTCCGTCATGGAGGTTCCTGA | 561 | 0.492 | MEAAPPSNDLCSVCHGNFHLPCQANCSHWFCANCIMLVWQHGSGTSSCKCPLCRRPITLLVPTEHSLRQRHDPEVAQILSKIHAYNRVFGGQPSSFFQRLQDLPFLLHRLLREFLDPHRSLPLVVRARVFIAMIASFLYILSPIDFIPEGVLGIVGLLDDVLIGLICFLHVAALYRSVLYLRHGGS* | 187 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu5g0018 | 186 | SMART | ring_2 | 11 | 53 | IPR001841 | - | |
Pvu5g0018 | 186 | SUPERFAMILY | RING/U-box | 7 | 62 | - | - | |
Pvu5g0018 | 186 | ProSitePatterns | Zinc finger RING-type signature. | 26 | 35 | IPR017907 | - | |
Pvu5g0018 | 186 | PANTHER | BNAC07G13660D PROTEIN | 5 | 186 | - | - | |
Pvu5g0018 | 186 | PANTHER | UNCHARACTERIZED | 5 | 186 | IPR038896 | GO:0061630 | |
Pvu5g0018 | 186 | ProSiteProfiles | Zinc finger RING-type profile. | 11 | 54 | IPR001841 | - | |
Pvu5g0018 | 186 | Pfam | Protein of unknown function (DUF1232) | 131 | 163 | IPR010652 | - | |
Pvu5g0018 | 186 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 2 | 91 | IPR013083 | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu5g0018 | 36 | 186 | C3H Transcription Factor Family | AT1G72175 | 69.536 | 3.62e-64 | 192 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu5g0018 | K15707 | - | gmx:100306204 | 317.005 |