Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1878 ATGAAACCACAATGCTGCTTCTCAAACCTAACATCCTATCAATTCTCTGAGACATCATTCCTCGAGAAATCAAAGATGTCGAGGATGAATTCAGAGAAGAAGCTTGGTGCAGGACGTGTGGTGGCTGTGGCCATTGAGAACAACAAGACCAGCCAACACGCTGCCAAGTGGGCAGTGGACAATCTTCTCCCCAAGGACCAATGTCTCTTACTCATCCATGTCAGACAAAGATCATCTTCAGGGAATTCTGCGAACGAACTTGTGGGCGACAACGAATCCAAGGAACTATTTGAATCATTTAGAGTTTTCTGCAACAGGAAAAGTATACAATGCAGAGAAATGTTGTTGGAGGACGTGGATATAGCAAAGGCATTAGGAGAAAGCATTGTCATGAATTCTATCGAGCTTCTTGTACTTGGGGCGCCATCAAGGGGTGGCCTTGTTAGAAGATTTAGAACAACGGATATTCCAAGCACTGTGTCAAAGGCAGCACCACCATTCTGCACTGTGTATATAATTTCTAAAGGAAAAATCTCAAGTGTGAAAACAGCTACTGCTCCATTGGCTCCTAAACCTGCCGCAGCACGTAACCCATTGCAGCCACAGCAACAGCCACAGCCACAGCCACAGCCACGCCACCAATCACTGATGCGAAGTCCTGAAAGATTGTTGGAAGCTCATCCAACCCGCAGCACCTACCCACCACGACCTTCATTTGGGAGTGGGACACGCCAGATGGCGTTGGATGATGATGATATCATATCACCATTCACAAGGGCTGGCAGAACATACGAGTCTTCAAAACTTCCCGATTCTGACATATCATTTGTGAGCAGCGGAAGGCCAAGTATTGATCGAATATTCCCAACAATGTACGACGATTTGGACAGTGCTAGCAGTGGAATGGCCACGGGTAGGTATTCGTGTGTGTCAGATTCTGACGCCAGAAGCTTCGCTTCTTCATTGTCCTCGCAAGGATACAATAGCAATGATGACTACTCCTTCACCTCCTCGCAACCAAGGCTATCAGACTGCACGGATGACGTTGAAATGGAGATGAGGAGACTGAAGCTGGAACTGAAGCAGACGATGGATATGTACAACTCAGCCTGCAAGGAAGCTATGAGTGCAAAGCAGAGGGCAATGGAGGTTCAACGTTGGAAAGCGGAAGAACAGAAGAAATTGGAAGATTCGCAAACGGGTGATGCCTCAACCACACGACTGATGGAGATGGAGCAGAATAGGATCAGAGAAGAAATTGCCGCATTGGAAGCACAGAAGAGAATGAGCCACGTGGAGAGGAAGAAACCAAGTGAAGGCTTCGGCACTGCCATGTACAGAAGGTACAGCATTGAGGAAATCGAAAAGGCAACAAATATGTTTTCTGACTCTGTCAAGATCGGCGAAGGAGGTTATGGTCCAGTCTACAGGGGTGAACTGGACTGCACCCAGGTCGCCATCAAGGTCTTGAAGCCAGATGCAGATCAAGGACGCGAGCAGTTTCAGCAGGAAGTAGAAGTGTTGAGTTGCATAAGGCATCCAAACATGGTTCTGTTGGTGGGGGCATGTCCAGAGTATGGTTGTCTTGTGTATGAGTACATGGCCAATGGAAGCTTGGATGATTGCTTGTTCAGGAAGGGAAGTTCTCGTCCAGCTCTTCCATGGCAGCTAAGGTTCCAAATTGCCGCAGAGATAGCAACAGGTCTGCTTTTCCTTCACCAGACAAAACCAGAGCCACTGGTGCACCGCGATCTGAAACCGGGCAACATTCTCCTTGACCGGAACTACGTGAGCAAGATCAGCGACGTGGGGTTGGCGAGGCTGGTGCCTCCTTCGGTTGCTGACACCGTGACTCAGTATCGCATGACTTCCACTGCCGGAACCTTCTGCTACATCGACCCGGAGTACCAGCAAACGGGCATGCTGGGAATCAAATCTGACATATACTCTCTGGGGATCATGCTTCTGCAACTGGTGACGGCGAAGCCTCCGATGGGTTTGACTCATCATGTTGGGAGAGCCATCGAGAAGGGAAATTTTGCTGAGATGCTTGACCCTGCTGTTGAGGACTGGCCTGTTGAACATGCCATGCATTTCGCAAAGCTTTGTCTGGGATGTGCCGAAATGAGGAGAAAAGATAGGCCTGATCTTGGAAAAGTTGTCTTGCCTGAGCTCAACAAGCTCAGGATATTTGCAGAAGAAAGCATGTCACCGATGATGATGTTTGGACTTCGAAGTGGTGGTGGTGCAGGGTATCTTCCAAGAACCAGTAATTCCTCATCCACATTTTCTGAGACGAGTGAAACGTTGTCTGGGTTCTCAGGATATGAAAGCCGTTCAAGTTCATCATCAGTGGGGAGAATGTAA 2367 0.4842 MKPQCCFSNLTSYQFSETSFLEKSKMSRMNSEKKLGAGRVVAVAIENNKTSQHAAKWAVDNLLPKDQCLLLIHVRQRSSSGNSANELVGDNESKELFESFRVFCNRKSIQCREMLLEDVDIAKALGESIVMNSIELLVLGAPSRGGLVRRFRTTDIPSTVSKAAPPFCTVYIISKGKISSVKTATAPLAPKPAAARNPLQPQQQPQPQPQPRHQSLMRSPERLLEAHPTRSTYPPRPSFGSGTRQMALDDDDIISPFTRAGRTYESSKLPDSDISFVSSGRPSIDRIFPTMYDDLDSASSGMATGRYSCVSDSDARSFASSLSSQGYNSNDDYSFTSSQPRLSDCTDDVEMEMRRLKLELKQTMDMYNSACKEAMSAKQRAMEVQRWKAEEQKKLEDSQTGDASTTRLMEMEQNRIREEIAALEAQKRMSHVERKKPSEGFGTAMYRRYSIEEIEKATNMFSDSVKIGEGGYGPVYRGELDCTQVAIKVLKPDADQGREQFQQEVEVLSCIRHPNMVLLVGACPEYGCLVYEYMANGSLDDCLFRKGSSRPALPWQLRFQIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQLVTAKPPMGLTHHVGRAIEKGNFAEMLDPAVEDWPVEHAMHFAKLCLGCAEMRRKDRPDLGKVVLPELNKLRIFAEESMSPMMMFGLRSGGGAGYLPRTSNSSSTFSETSETLSGFSGYESRSSSSSVGRM* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1878 788 CDD STK_N 40 176 - -
Pvu4g1878 788 Pfam Protein kinase domain 462 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1878 788 MobiDBLite consensus disorder prediction 756 788 - -
Pvu4g1878 788 MobiDBLite consensus disorder prediction 191 246 - -
Pvu4g1878 788 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 26 788 - -
Pvu4g1878 788 ProSitePatterns Serine/Threonine protein kinases active-site signature. 580 592 IPR008271 GO:0004672|GO:0006468
Pvu4g1878 788 Coils Coil 406 426 - -
Pvu4g1878 788 Gene3D Phosphorylase Kinase; domain 1 431 533 - -
Pvu4g1878 788 Gene3D Transferase(Phosphotransferase) domain 1 534 737 - -
Pvu4g1878 788 ProSiteProfiles Protein kinase domain profile. 461 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1878 788 PANTHER OS02G0152300 PROTEIN 26 788 - -
Pvu4g1878 788 MobiDBLite consensus disorder prediction 320 343 - -
Pvu4g1878 788 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 41 152 - -
Pvu4g1878 788 SMART serkin_6 461 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1878 788 Gene3D HUPs 20 173 IPR014729 -
Pvu4g1878 788 SUPERFAMILY Protein kinase-like (PK-like) 442 721 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1878 Pvu-Chr4 45758274 45761901 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1878 41 745 Receptor kinase-like Gene Family AT5G35380 54.533 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pvu4g1878 Pkinase 4.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1878 - - pvu:PHAVU_004G177800g 1468.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3115 2 46509155 46513460 Pvu4g1878 4 45758274 45761901 PCT