Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1873 ATGCACAAAACACTCTTCTTTTTTTCCACTTTTTTCCCACGCACCCTTCGGTTCTTGCCTCCTTTTCTAGCCTTCCATTTCAACCCTTTCCTTTTTCAACTCTGCTACTTCCTCATCCTTTCTGTGGTAGGTTTTCTGGGTCTCAAGCTTTCAAAGCCAAGGACCCCTTCTATGCCTAATAACTTGGATCTCTTCTACACCTCAGTTTCTGCTTCCACAACTTCTAGCATGGTAGCCTTGGAAATGGAGGTTTTCTCCAATTCTCAACTAATTCTCCTCACCCTTCTCATGTTTCTTGGAGGGGAAGTTTTCACTTCCATGCTCGACCTTCTACTTGCTAGGAATAAACTATTTCACACTACCATCAATCCTTTTTCACACTCACACCAGTCCCCAACCAATGCCACTCAAATTGAGCTTGGTTTAGTTTCTATTCCTCACTCAAAATCAGAAAACCACACACCTTCTCATAATGTTGCATGCATTAGACTTAAGTATAACTCTCTTCGTTATCTGACTTACGTGGTGTTTGGTTATCTTGTGATGGTTCAATTGGTTGGCTTTAGTATGGTGTCTTTCTATATGACTGTGGTAGCAAGTGCAAGACAAGTACTGAAAAATAAAGACATTAAGATTGCAACATTTTCTTTGTTTACCATAGTTTCCACTTTTGCTAGTTGTGGTTTTGTCCCCACCAACGAGAACATGATGGTTTTCAAGAACAATTCGGGGCTTCTCCTCCTTATCCTACCACATGTGTTTCTAGGTAACACCCTGTATCCACCCTGTCTCACACTTGTGCTAATGGTTTTGGAAAAAGTTACCAGAAAAGAGGAATTCTCACACTTGCTAAAGAATTCCAAAAACTTGGGCTATAGACACTTGTTCTCTGTTTCTCGTTGTTGCCTTCTGGTTTGTACAGTGTTTGGTTTGAATGTTGTACAGTTTGTGATGTTTTGGTCTGTGGAATGGAACTCCGAGATCATGGAGGGTATGAATTTGTATGAGAAAGTGGTAGCATCATTGTTTCAAGTAACAAACGCCAGACACGCTGGTGAATCTGTTTTTGATCTCTCCTCCATCTCTTCAGCCATATTAGTACTGTTCATTGTGATGATGTACCTTCCACCATACACTACATTTTTACCTGTAAGAGAAGAGGAAAATGATGTGAAGAGAAATGGGAAAAGTGCAGTGGAGTGTGTTGTATTATCTCAACTATCTTACTTGGCCATATTCATTATTCTGGTTTGCATCACTGAGAGAAAAAGCTTGAAAGAGGATCCCATCAACTTCAATGTCCTCAACATCACCCTAGAAGTCATCAGTGCTTATGGGAACGTGGGGTTCTCAATGGGATACAGCTGCGGAAGACAGTTGAAAGACGATGGTATGTGTAAAGATTCATGGGTTGGATTTTCAGGTAGATGGAGTAATGGTGGAAAGTTCATCCTTATCTTGGTCATGTTCTTTGGGAGACTCAAGAAATTCAACATGAAAGGTGGCAAAGCATGGCACCTCTCCTAA 1527 0.4086 MHKTLFFFSTFFPRTLRFLPPFLAFHFNPFLFQLCYFLILSVVGFLGLKLSKPRTPSMPNNLDLFYTSVSASTTSSMVALEMEVFSNSQLILLTLLMFLGGEVFTSMLDLLLARNKLFHTTINPFSHSHQSPTNATQIELGLVSIPHSKSENHTPSHNVACIRLKYNSLRYLTYVVFGYLVMVQLVGFSMVSFYMTVVASARQVLKNKDIKIATFSLFTIVSTFASCGFVPTNENMMVFKNNSGLLLLILPHVFLGNTLYPPCLTLVLMVLEKVTRKEEFSHLLKNSKNLGYRHLFSVSRCCLLVCTVFGLNVVQFVMFWSVEWNSEIMEGMNLYEKVVASLFQVTNARHAGESVFDLSSISSAILVLFIVMMYLPPYTTFLPVREEENDVKRNGKSAVECVVLSQLSYLAIFIILVCITERKSLKEDPINFNVLNITLEVISAYGNVGFSMGYSCGRQLKDDGMCKDSWVGFSGRWSNGGKFILILVMFFGRLKKFNMKGGKAWHLS* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1873 508 Pfam Cation transport protein 165 460 IPR003445 GO:0006812|GO:0008324|GO:0055085
Pvu4g1873 508 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 23 508 - -
Pvu4g1873 508 PANTHER SODIUM TRANSPORTER HKT1 23 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1873 Pvu-Chr4 45727602 45730066 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1873 49 507 Inorganic Solute Cotransporters AT4G10310 50.855 1.08e-157 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1873 K24976 - gmx:100797835 730.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1873 4 45727602 45730066 Pvu4g1873 4 45727602 45730066 ECH